NeuroPred: a tool to predict cleavage sites in neuropeptide precursors and provide the masses of the resulting peptides. - Bruce R. Southey; Andinet Amare; Tyler A. Zimmerman; Sandra L. Rodriguez-Zas; Jonathan V. Sweedler (Nucleic Acids Res., 2006)

Enhanced Prediction of Cleavage in Bovine Precursor Sequences. - Allison N. Tegge; Sandra L. Rodriguez-Zas; Jonathan V. Sweedler; Bruce R. Southey (ISBRA, 2007)

Prediction of neuropeptide cleavage sites in insects. - Bruce R. Southey; Jonathan V. Sweedler; Sandra L. Rodriguez-Zas (Bioinform., 2008)

A Python analytical pipeline to identify prohormone precursors and predict prohormone cleavage sites. - Bruce R. Southey; Jonathan V. Sweedler; Sandra L. Rodriguez-Zas (Frontiers Neuroinformatics, 2008)

Comparison of tandem mass spectrometry search methods to identify neuropeptides. - Malik N. Akhtar; Bruce R. Southey; Kenneth I. Porter; Jonathan V. Sweedler; Sandra L. Rodriguez-Zas (BIBM Workshops, 2011)

Model of ion intensity from tandem mass spectra for improved peptide identification and simulation. - Zeeshan Fazal; Bruce R. Southey; Ahmed Sadeque; Jonathan V. Sweedler; Sandra L. Rodriguez-Zas (BIBM Workshops, 2011)

Integration of sequence and functional information to identify and annotate neuropeptides in the pig genome. - Kenneth I. Porter; Bruce R. Southey; Malik N. Akhtar; Jonathan V. Sweedler; Sandra L. Rodriguez-Zas (BIBM Workshops, 2011)

Discovery of new enzymes and metabolic pathways by using structure and genome context. - Suwen Zhao; Ritesh Kumar; Ayano Sakai; Matthew W. Vetting; B. McKay Wood; Shoshana D. Brown; Jeffery B. Bonanno; Brandan S. Hillerich; Ronald D. Seidel; Patricia C. Babbitt; Steven C. Almo; Jonathan V. Sweedler; et al. (Nat., 2013)

Identification of best indicators of peptide-spectrum match using a permutation resampling approach. - Malik N. Akhtar; Bruce R. Southey; Per E. Andrén; Jonathan V. Sweedler; Sandra L. Rodriguez-Zas (J. Bioinform. Comput. Biol., 2014)

The ctenophore genome and the evolutionary origins of neural systems Open. - Leonid L. Moroz; Kevin M. Kocot; Mathew R. Citarella; Sohn Dosung; Tigran P. Norekian; Inna S. Povolotskaya; Anastasia P. Grigorenko; Christopher Dailey; Eugene Berezikov; Katherine M. Buckley; Andrey A. Ptitsyn; Denis A. Reshetov; et al. (Nat., 2014)

Confronting Racism in Chemistry Journals. - Cynthia J. Burrows; Jiaxing Huang 002; Shu Wang; Hyun Jae Kim; Gerald J. Meyer; Kirk Schanze; T. Randall Lee; Jodie L. Lutkenhaus; David Kaplan; Christopher Jones; Carolyn R. Bertozzi; Laura Kiessling; et al. (J. Chem. Inf. Model., 2020)

Update to Our Reader, Reviewer, and Author Communities - April 2020. - Cynthia J. Burrows; Shu Wang; Hyun Jae Kim; Gerald J. Meyer; Kirk Schanze; T. Randall Lee; Jodie L. Lutkenhaus; David Kaplan; Christopher Jones; Carolyn R. Bertozzi; Laura Kiessling; Mary Beth Mulcahy; et al. (J. Chem. Inf. Model., 2020)