OptORF: Optimal metabolic and regulatory perturbations for metabolic engineering of microbial strains. - Joonhoon Kim; Jennifer L. Reed (BMC Syst. Biol., 2010)

An Automated Phenotype-Driven Approach (GeneForce) for Refining Metabolic and Regulatory Models. - Dipak Barua; Joonhoon Kim; Jennifer L. Reed (PLoS Comput. Biol., 2010)