hepaccelerate: Fast Analysis of Columnar Collider Data. - Joosep Pata; Maria Spiropulu (CoRR, 2019)

Diolkos: improving ethernet throughput through dynamic port selection. - Oceane Bel; Joosep Pata; Jean-Roch Vlimant; Nathan R. Tallent; Justas Balcas; Maria Spiropulu (CF, 2021)

MLPF: Efficient machine-learned particle-flow reconstruction using graph neural networks. - Joosep Pata; Javier M. Duarte; Jean-Roch Vlimant; Maurizio Pierini; Maria Spiropulu (CoRR, 2021)

Explaining machine-learned particle-flow reconstruction. - Farouk Mokhtar; Raghav Kansal; Daniel Diaz 003; Javier M. Duarte; Joosep Pata; Maurizio Pierini; Jean-Roch Vlimant (CoRR, 2021)

Sensitivity estimation for dark matter subhalos in synthetic Gaia DR2 using deep learning. - Abdullah Bazarov; María Benito; Gert Hütsi; Rain Kipper; Joosep Pata; Sven Põder (Astron. Comput., 2022)

Machine Learning for Particle Flow Reconstruction at CMS. - Joosep Pata; Javier M. Duarte; Farouk Mokhtar; Eric Wulff; Jieun Yoo; Jean-Roch Vlimant; Maurizio Pierini; Maria Girone (CoRR, 2022)

Hyperparameter optimization of data-driven AI models on HPC systems. - Eric Wulff; Maria Girone; Joosep Pata (CoRR, 2022)

Progress towards an improved particle flow algorithm at CMS with machine learning. - Farouk Mokhtar; Joosep Pata; Javier M. Duarte; Eric Wulff; Maurizio Pierini; Jean-Roch Vlimant (CoRR, 2023)

Scalable neural network models and terascale datasets for particle-flow reconstruction. - Joosep Pata; Eric Wulff; Farouk Mokhtar; David Southwick; Mengke Zhang; Maria Girone; Javier M. Duarte (CoRR, 2023)

Tau lepton identification and reconstruction: A new frontier for jet-tagging ML algorithms. - Torben Lange; Saswati Nandan; Joosep Pata; Laurits Tani; Christian Veelken (Comput. Phys. Commun., 2024)

A unified machine learning approach for reconstructing hadronically decaying tau leptons. - Laurits Tani; Nalong-Norman Seeba; Hardi Vanaveski; Joosep Pata; Torben Lange (Comput. Phys. Commun., 2025)

Fine-tuning machine-learned particle-flow reconstruction for new detector geometries in future colliders. - Farouk Mokhtar; Joosep Pata; Dolores Garcia; Eric Wulff; Mengke Zhang; Michael Kagan; Javier M. Duarte (CoRR, 2025)