On the Importance of Polar Interactions for Complexes Containing Intrinsically Disordered Proteins. - Eric T. C. Wong; Dokyun Na; Jörg Gsponer (PLoS Comput. Biol., 2013)

Easyworm: an open-source software tool to determine the mechanical properties of worm-like chains. - Guillaume Lamour; Julius B. Kirkegaard; Hongbin Li; Tuomas P. J. Knowles; Jörg Gsponer (Source Code Biol. Medicine, 2014)

Computational identification of MoRFs in protein sequences. - Nawar Malhis; Jörg Gsponer (Bioinform., 2015)

Free energies of solvation in the context of protein folding: Implications for implicit and explicit solvent models. - Alexander Cumberworth; Jennifer M. Bui; Jörg Gsponer (J. Comput. Chem., 2016)

MoRFchibi SYSTEM: software tools for the identification of MoRFs in protein sequences. - Nawar Malhis; Matthew Jacobson; Jörg Gsponer (Nucleic Acids Res., 2016)

LIST-S2: taxonomy based sorting of deleterious missense mutations across species. - Nawar Malhis; Matthew Jacobson; Steven J. M. Jones; Jörg Gsponer (Nucleic Acids Res., 2020)

DescribePROT: database of amino acid-level protein structure and function predictions. - Bi Zhao; Akila Katuwawala; Christopher J. Oldfield; A. Keith Dunker; Eshel Faraggi; Jörg Gsponer; Andrzej Kloczkowski; Nawar Malhis; Milot Mirdita; Zoran Obradovic; Johannes Söding; Martin Steinegger; et al. (Nucleic Acids Res., 2021)

GraPES: The Granule Protein Enrichment Server for prediction of biological condensate constituents. - Erich R. Kuechler; Matthew Jacobson; Thibault Mayor; Jörg Gsponer (Nucleic Acids Res., 2022)

DEPICTER2: a comprehensive webserver for intrinsic disorder and disorder function prediction. - Sushmita Basu; Jörg Gsponer; Lukasz A. Kurgan (Nucleic Acids Res., 2023)

CAID prediction portal: a comprehensive service for predicting intrinsic disorder and binding regions in proteins. - Alessio Del Conte; Adel Bouhraoua; Mahta Mehdiabadi; Damiano Clementel; Alexander Miguel Monzon; Alex S. Holehouse; Daniel A. Griffith; Ryan J. Emenecker; Ashwini Patil; Ronesh Sharma; Tatsuhiko Tsunoda; Alok Sharma; et al. (Nucleic Acids Res., 2023)

Autoinhibited Protein Database: a curated database of autoinhibitory domains and their autoinhibition mechanisms. - Daeahn Cho; Hyang-Mi Lee; Ji Ah Kim; Jae Gwang Song; Su-hee Hwang; Bomi Lee; Jinsil Park; Kha Mong Tran; Jiwon Kim; Phuong Ngoc Lam Vo; Jooeun Bae; Teerapat Pimt; et al. (Database J. Biol. Databases Curation, 2024)