A diVIsive Shuffling Approach (VIStA) for gene expression analysis to identify subtypes in Chronic Obstructive Pulmonary Disease. - Jörg Menche; Amitabh Sharma; Michael H. Cho; Ruth J. Mayer; Stephen I. Rennard; Bartolome Celli; Bruce E. Miller; Nick Locantore; Ruth Tal-Singer; Soumitra Ghosh; Chris Larminie; Glyn Bradley; et al. (BMC Syst. Biol., 2014)

A DIseAse MOdule Detection (DIAMOnD) Algorithm Derived from a Systematic Analysis of Connectivity Patterns of Disease Proteins in the Human Interactome. - Susan Dina Ghiassian; Jörg Menche; Albert-László Barabási (PLoS Comput. Biol., 2015)

From comorbidities of chronic obstructive pulmonary disease to identification of shared molecular mechanisms by data integration. - David Gomez-Cabrero; Jörg Menche; Claudia Vargas; Isaac Cano; Dieter Maier; Albert-László Barabási; Jesper Tegnér; Josep Roca (BMC Bioinform., 2016)

BioProfiling.jl: profiling biological perturbations with high-content imaging in single cells and heterogeneous populations. - Loan Vulliard; Joel Hancock; Anton Kamnev; Christopher W. Fell; Joana Ferreira da Silva; Joanna I Loizou; Vanja Nagy; Loïc Dupré; Jörg Menche (Bioinform., 2022)

Network cartographs for interpretable visualizations. - Christiane V. R. Hütter; Celine Sin; Felix Müller; Jörg Menche (Nat. Comput. Sci., 2022)