Identifikation nichtlinearer dynamischer Systeme mit künstlichen neuronalen Netzen. - Jörg Schultz (VDI-Verlag, 1998)

A new approach to determine the neural network's domain of validity by elliptic expansion. - Jörg Schultz; Volker Krebs (ECC, 1999)

SMART: identification and annotation of domains from signalling and extracellular protein sequences. - Chris P. Ponting; Jörg Schultz; Frank Milpetz; Peer Bork (Nucleic Acids Res., 1999)

SMART: a web-based tool for the study of genetically mobile domains. - Jörg Schultz; Richard R. Copley; Tobias Doerks; Chris P. Ponting; Peer Bork (Nucleic Acids Res., 2000)

Recent improvements to the SMART domain-based sequence annotation resource. - Ivica Letunic; Leo Goodstadt; Nicholas J. Dickens; Tobias Doerks; Jörg Schultz; Richard Mott; Francesca D. Ciccarelli; Richard R. Copley; Chris P. Ponting; Peer Bork (Nucleic Acids Res., 2002)

HMM Logos for visualization of protein families. - Benjamin Schuster-Böckler; Jörg Schultz; Sven Rahmann (BMC Bioinform., 2004)

SMART 4.0: towards genomic data integration. - Ivica Letunic; Richard R. Copley; Steffen Schmidt; Francesca D. Ciccarelli; Tobias Doerks; Jörg Schultz; Chris P. Ponting; Peer Bork (Nucleic Acids Res., 2004)

Variation in structural location and amino acid conservation of functional sites in protein domain families. - Birgit Pils; Richard R. Copley; Jörg Schultz (BMC Bioinform., 2005)

Modelling interaction sites in protein domains with interaction profile hidden Markov models. - Torben Friedrich; Birgit Pils; Thomas Dandekar; Jörg Schultz; Tobias Müller 001 (Bioinform., 2006)

4SALE - A tool for synchronous RNA sequence and secondary structure alignment and editing. - Philipp N. Seibel; Tobias Müller 001; Thomas Dandekar; Jörg Schultz; Matthias Wolf 002 (BMC Bioinform., 2006)

SMART 5: domains in the context of genomes and networks. - Ivica Letunic; Richard R. Copley; Birgit Pils; Stefan Pinkert; Jörg Schultz; Peer Bork (Nucleic Acids Res., 2006)

The internal transcribed spacer 2 database - a web server for (not only) low level phylogenetic analyses. - Jörg Schultz; Tobias Müller 001; Marco Achtziger; Philipp N. Seibel; Thomas Dandekar; Matthias Wolf 002 (Nucleic Acids Res., 2006)

Context-Specific Independence Mixture Modelling for Protein Families. - Benjamin Georgi; Jörg Schultz; Alexander Schliep (PKDD, 2007)

Genome Expression Pathway Analysis Tool - Analysis and visualization of microarray gene expression data under genomic, proteomic and metabolic context. - Markus Weniger; Julia C. Engelmann; Jörg Schultz (BMC Bioinform., 2007)

ProfDistS: (profile-) distance based phylogeny on sequence - structure alignments. - Matthias Wolf 002; Benjamin Ruderisch; Thomas Dandekar; Jörg Schultz; Tobias Müller 001 (Bioinform., 2008)

The ITS2 Database II: homology modelling RNA structure for molecular systematics. - Christian Selig; Matthias Wolf 002; Tobias Müller 001; Thomas Dandekar; Jörg Schultz (Nucleic Acids Res., 2008)

Searching in Protein State Space. - Dietmar Seipel; Jörg Schultz (INAP, 2009)

The ITS2 Database III - sequences and structures for phylogeny. - Christian Koetschan; Frank Förster; Alexander Keller 006; Tina Schleicher; Benjamin Ruderisch; Roland Schwarz 002; Tobias Müller 001; Matthias Wolf 002; Jörg Schultz (Nucleic Acids Res., 2010)

Protein Interaction Networks - More Than Mere Modules. - Stefan Pinkert; Jörg Schultz; Jörg Reichardt (PLoS Comput. Biol., 2010)

proovread: large-scale high-accuracy PacBio correction through iterative short read consensus. - Thomas Hackl; Rainer Hedrich; Jörg Schultz; Frank Förster (Bioinform., 2014)

ISAAC - InterSpecies Analysing Application using Containers. - Herbert Baier; Jörg Schultz (BMC Bioinform., 2014)

reper: Genome-wide identification, classification and quantification of repetitive elements without an assembled genome. - Niklas Terhoeven; Jörg Schultz; Thomas Hackl (J. Open Source Softw., 2018)

BCdatabaser: on-the-fly reference database creation for (meta-)barcoding. - Alexander Keller 006; Sonja Hohlfeld; Andreas Kolter; Jörg Schultz; Birgit Gemeinholzer; Markus J. Ankenbrand (Bioinform., 2020)