TFMLAB: A MATLAB toolbox for 4D traction force microscopy. - Jorge Barrasa-Fano; Apeksha Shapeti; Álvaro Jorge-Peñas; Mojtaba Barzegari; José Antonio Sanz-Herrera; Hans Van Oosterwyck (SoftwareX, 2021)

Semantic Image Segmentation of Cell Volumes Using 3D U-Net Convolutional Neural Network. - Lazar Dasic; Jorge Barrasa-Fano; Ognjen Pavic; Tijana Geroski; Apeksha Shapeti; Hans Van Oosterwyck; Vesna Rankovic; Nenad Filipovic (BIBE, 2024)

Unsupervised Deep Learning Method for Cell Segmentation of Confocal Microscopy Images. - Ognjen Pavic; Jorge Barrasa-Fano; Lazar Dasic; Tijana Geroski; Apeksha Shapeti; Hans Van Oosterwyck; Vesna Rankovic; Nenad Filipovic (BIBE, 2024)

SGABU computational platform for multiscale modeling: Bridging the gap between education and research. - Tijana Geroski; Orestis Gkaintes; Aleksandra Vulovic; Niketa Ukaj; Jorge Barrasa-Fano; Fernando Perez-Boerema; Bogdan Milicevic; Aleksandar Atanasijevic; Jelena Zivkovic; Andreja Zivic; Maria Roumpi; Themis P. Exarchos; et al. (Comput. Methods Programs Biomed., 2024)

Multiphysics modeling of 3D traction force microscopy with application to cancer cell-induced degradation of the extracellular matrix. - Alejandro Apolinar-Fernández; Jorge Barrasa-Fano; Hans Van Oosterwyck; José Antonio Sanz-Herrera (Eng. Comput., 2025)