Self and Nonself Revisited: Lessons from Modelling the Immune Network. - Jorge Carneiro; John Stewart (ECAL, 1995)

Towards an Immune-inspired Temporal Anomaly Detection Algorithm based on Tunable Activation Thresholds. - Mário João Gonçalves Antunes; Manuel Eduardo Correia; Jorge Carneiro (BIOSIGNALS, 2009)

Diversity and Plasticity of Th Cell Types Predicted from Regulatory Network Modelling. - Aurélien Naldi; Jorge Carneiro; Claudine Chaouiya; Denis Thieffry (PLoS Comput. Biol., 2010)

Modeling the effector - regulatory T cell cross-regulation reveals the intrinsic character of relapses in Multiple Sclerosis. - Nieves Vélez de Mendizábal; Jorge Carneiro; Ricard V. Solé; Joaquín Goñi; Jean Bragard; Ivan Martinez-Forero; Sara Martinez-Pasamar; Jorge Sepulcre; Francisco Javier Torrealdea; Francesca Bagnato; Jordi García-Ojalvo; Pablo Villoslada (BMC Syst. Biol., 2011)

Environment classification in multiagent systems inspired by the adaptive immune system. - Danesh Tarapore; Anders Lyhne Christensen; Pedro U. Lima; Jorge Carneiro (ALIFE, 2012)

Clonal Expansion without Self-replicating Entities. - Danesh Tarapore; Anders Lyhne Christensen; Pedro U. Lima; Jorge Carneiro (ICARIS, 2012)

Abnormality detection in multiagent systems inspired by the adaptive immune system. - Danesh Tarapore; Anders Lyhne Christensen; Pedro U. Lima; Jorge Carneiro (AAMAS, 2013)

Optimizing the Crossregulation Model for Scalable Abnormality Detection. - Danesh Tarapore; Pedro U. Lima; Jorge Carneiro; Anders Lyhne Christensen (ALIFE, 2014)

Quantification of reachable attractors in asynchronous discrete dynamics. - Nuno D. Mendes; Pedro T. Monteiro 001; Jorge Carneiro; Elisabeth Remy; Claudine Chaouiya (CoRR, 2014)

Quantifying the Length and Variance of the Eukaryotic Cell Cycle Phases by a Stochastic Model and Dual Nucleoside Pulse Labelling. - Tom Serge Weber; Irene Jaehnert; Christian Schichor; Michal Or-Guil; Jorge Carneiro (PLoS Comput. Biol., 2014)

Partitioning stable and unstable expression level variation in cell populations: A theoretical framework and its application to the T cell receptor. - Thiago S. Guzella; Vasco M. Barreto; Jorge Carneiro (PLoS Comput. Biol., 2020)

Modular analysis of the control of flagellar Ca2+-spike trains produced by CatSper and CaV channels in sea urchin sperm. - Daniel Priego-Espinosa; Alberto Darszon; Adán Guerrero; Ana Laura González-Cota; Takuya Nishigaki; Gustavo Martinez-Mekler; Jorge Carneiro (PLoS Comput. Biol., 2020)

A first-takes-all model of centriole copy number control based on cartwheel elongation. - Marco António Dias Louro; Mónica Bettencourt-Dias; Jorge Carneiro (PLoS Comput. Biol., 2021)

Automated Ceramics Tableware Finishing: Non-Circular Geometries Case Study. - Mariano Alvarez; Laiany Brancalião; Jorge Carneiro; Paulo Costa 001; João Paulo Coelho; José Gonçalves 001 (ETFA, 2023)

A Systematic Review on Deep Learning with CNNs Applied to Surface Defect Detection. - Esteban Cumbajin; Nuno Rodrigues; Paulo Costa; Rolando Miragaia; Luís Frazão; Nuno Costa 001; Antonio Fernández-Caballero 001; Jorge Carneiro; Leire H. Buruberri; António Pereira 001 (J. Imaging, 2023)

A Real-Time Automated Defect Detection System for Ceramic Pieces Manufacturing Process Based on Computer Vision with Deep Learning. - Esteban Cumbajin; Nuno Rodrigues; Paulo Costa; Rolando Miragaia; Luís Frazão; Nuno Costa 001; Antonio Fernández-Caballero 001; Jorge Carneiro; Leire H. Buruberri; António Pereira 001 (Sensors, 2024)