ExInt: an Exon Intron Database. - Meena K. Sakharkar; F. Passetti; Jorge Estefano de Souza; Manyuan Long; Sandro J. de Souza (Nucleic Acids Res., 2002)

Integrating Transcriptome and Proteome Information for the Analysis of Alternative Splicing. - Jose Eduardo Kroll; Jorge Estefano de Souza; Beatriz Stransky; Gustavo A. de Souza; Sandro J. de Souza (HISB, 2012)

Assessing the Sex-Related Genomic Composition Difference Using a k-mer-Based Approach: A Case of Study in Arapaima gigas (Pirarucu). - Renata Lilian Dantas Cavalcante; José Miguel Ortega; Jorge Estefano Santana de Souza; Tetsu Sakamoto (BSB, 2020)

A decision tree to improve identification of pathogenic mutations in clinical practice. - Priscilla Machado do Nascimento; Inácio Gomes Medeiros; Raul Maia Falcão; Beatriz Stransky; Jorge Estefano Santana de Souza (BMC Medical Informatics Decis. Mak., 2020)

Multi-GPU Approach for Large-Scale Multiple Sequence Alignment. - Rodrigo A. de O. Siqueira; Marco Aurelio Stefanes; Luiz C. S. Rozante; David Correa Martins Jr.; Jorge Estefano Santana de Souza; Eloi Araujo (ICCSA (1), 2021)

DTreePred: an online viewer based on machine learning for pathogenicity prediction of genomic variants. - Daniel Henrique Ferreira Gomes; Inácio Gomes Medeiros; Tirzah Braz Petta; Beatriz Stransky; Jorge Estefano Santana de Souza (BMC Bioinform., 2025)