Cartesian Genetic Programming with Crossover for Designing Combinational Logic Circuits. - José Eduardo Henriques da Silva; Heder Bernardino (BRACIS, 2018)

A 3-Step Cartesian Genetic Programming for Designing Combinational Logic Circuits with Multiplexers. - José Eduardo Henriques da Silva; Heder Soares Bernardino (EPIA (1), 2019)

Cartesian Genetic Programming with Guided and Single Active Mutations for Designing Combinational Logic Circuits. - José Eduardo Henriques da Silva; Lucas Augusto Müller de Souza; Heder Soares Bernardino (LOD, 2019)

Inferring Gene Regulatory Network Models from Time-Series Data Using Metaheuristics. - José Eduardo Henriques da Silva; Heder S. Bernardino; Helio José Corrêa Barbosa; Alex Borges Vieira; Luciana C. D. Campos; Itamar Leite de Oliveira (CEC, 2020)

A benchmark suite for designing combinational logic circuits via metaheuristics. - Lucas Augusto Müller de Souza; José Eduardo Henriques da Silva; Luciano Jerez Chaves; Heder Soares Bernardino (Appl. Soft Comput., 2020)

On the Analysis of CGP Mutation Operators When Inferring Gene Regulatory Networks Using ScRNA-Seq Time Series Data. - José Eduardo Henriques da Silva; Heder S. Bernardino; Itamar Leite de Oliveira; Alex Borges Vieira; Helio J. C. Barbosa (BRACIS (1), 2021)

High-performance cartesian genetic programming on GPU for the inference of gene regulatory networks using scRNA-seq time-series data. - Luciana Nascimento Santana Prachedes; José Eduardo Henriques da Silva; Heder Soares Bernardino; Itamar Leite de Oliveira (GECCO Companion, 2022)

Inferring Gene Regulatory Networks from Single-Cell RNA-Sequencing Experimental Data using Cartesian Genetic Programming. - José Eduardo Henriques da Silva; Heder S. Bernardino; Itamar Leite de Oliveira; José J. Camata; Patrick C. de Carvalho (CEC, 2024)

A Data-Distribution and Successive Spline Points based discretization approach for evolving gene regulatory networks from scRNA-Seq time-series data using Cartesian Genetic Programming. - José Eduardo Henriques da Silva; Patrick C. de Carvalho; José J. Camata; Itamar Leite de Oliveira; Heder S. Bernardino (Biosyst., 2024)

A survey of the methodological process of modeling, inference, and evaluation of gene regulatory networks using scRNA-Seq data. - José Eduardo Henriques da Silva; Heder S. Bernardino; Itamar Leite de Oliveira; José J. Camata (Biosyst., 2025)