Perldoop: Efficient execution of Perl scripts on Hadoop clusters. - José Manuel Abuín; Juan Carlos Pichel; Tomás F. Pena; Pablo Gamallo Otero; Marcos García 001 (IEEE BigData, 2014)

Análisis morfosintáctico y clasificación de entidades nombradas en un entorno Big Data. - Pablo Gamallo 001; Juan Carlos Pichel; Marcos García 001; José Manuel Abuín; Tomás Fernandez Pena (Proces. del Leng. Natural, 2014)

BigBWA: approaching the Burrows-Wheeler aligner to Big Data technologies. - José Manuel Abuín; Juan Carlos Pichel; Tomás F. Pena; Jorge Amigo (Bioinform., 2015)

Perldoop2: A Big Data-Oriented Source-to-Source Perl-Java Compiler. - César Piñeiro; José Manuel Abuín; Juan Carlos Pichel (DASC/PiCom/DataCom/CyberSciTech, 2017)

PASTASpark: multiple sequence alignment meets Big Data. - José Manuel Abuín; Tomás F. Pena; Juan Carlos Pichel (Bioinform., 2017)

Very Fast Tree: speeding up the estimation of phylogenies for large alignments through parallelization and vectorization strategies. - César Piñeiro; José Manuel Abuín; Juan Carlos Pichel (Bioinform., 2020)

A big data approach to metagenomics for all-food-sequencing. - Robin Kobus; José Manuel Abuín; André Müller; Sören Lukas Hellmann; Juan Carlos Pichel; Tomás F. Pena; Andreas Hildebrandt 001; Thomas Hankeln; Bertil Schmidt (BMC Bioinform., 2020)