FRODOCK: a new approach for fast rotational protein-protein docking. - José Ignacio Garzón; José Ramón López-Blanco; Carles Pons; Julio A. Kovacs; Ruben Abagyan; Juan Fernández-Recio; Pablo Chacón (Bioinform., 2009)

iMod: multipurpose normal mode analysis in internal coordinates. - José Ramón López-Blanco; José Ignacio Garzón; Pablo Chacón (Bioinform., 2011)

Exploring large macromolecular functional motions on clusters of multicore processors. - José Ramón López-Blanco; Ruymán Reyes; José Ignacio Aliaga; Rosa M. Badia; Pablo Chacón; Enrique S. Quintana-Ortí (J. Comput. Phys., 2013)

iMODS: internal coordinates normal mode analysis server. - José Ramón López-Blanco; José Ignacio Aliaga; Enrique S. Quintana-Ortí; Pablo Chacón (Nucleic Acids Res., 2014)

FRODOCK 2.0: fast protein-protein docking server. - Erney Ramírez-Aportela; José Ramón López-Blanco; Pablo Chacón (Bioinform., 2016)

A fast band-Krylov eigensolver for macromolecular functional motion simulation on multicore architectures and graphics processors. - José Ignacio Aliaga; Pedro Alonso 002; José M. Badía; Pablo Chacón; Davor Davidovic; José Ramón López-Blanco; Enrique S. Quintana-Ortí (J. Comput. Phys., 2016)

RCD+: Fast loop modeling server. - José Ramón López-Blanco; Alejandro Jesús Canosa-Valls; Yaohang Li; Pablo Chacón (Nucleic Acids Res., 2016)

KORP: knowledge-based 6D potential for fast protein and loop modeling. - José Ramón López-Blanco; Pablo Chacón (Bioinform., 2019)

Local Normal Mode Analysis for Fast Loop Conformational Sampling. - José Ramón López-Blanco; Yves Dehouck; Ugo Bastolla; Pablo Chacón (J. Chem. Inf. Model., 2022)

Predicting protein stability changes upon mutation using a simple orientational potential. - Iván Martín Hernández; Yves Dehouck; Ugo Bastolla; José Ramón López-Blanco; Pablo Chacón (Bioinform., 2023)