aGEM: an integrative system for analyzing spatial-temporal gene-expression information. - Natalia Jiménez-Lozano; Joan Segura; José Ramón Macías; Juanjo Vega; José María Carazo (Bioinform., 2009)

Integrating human and murine anatomical gene expression data for improved comparisons. - Natalia Jiménez-Lozano; Joan Segura; José Ramón Macías; Juanjo Vega; José María Carazo (Bioinform., 2012)

3DBionotes COVID-19 edition. - José Ramón Macías; Rubén Sánchez García; Pablo Conesa; Erney Ramírez-Aportela; Marta Martínez; Carlos Wert-Carvajal; Alberto M. Parra-Perez; Joan Segura Mora; Sam Horrell; Andrea Thorn; Carlos Oscar Sánchez Sorzano; José María Carazo (Bioinform., 2021)

PDBe-KB: collaboratively defining the biological context of structural data. - Mihaly Varadi; Stephen Anyango; David R. Armstrong; John M. Berrisford; Preeti Choudhary; Mandar S. Deshpande; Nurul Nadzirin; Sreenath Nair; Lukás Pravda; Ahsan Tanweer; Bissan Al-Lazikani; Claudia Andreini; et al. (Nucleic Acids Res., 2022)