Quest: Effcient SPARQL-to-SQL for RDF and OWL. - Mariano Rodriguez-Muro; Josef Hardi; Diego Calvanese (ISWC (Posters & Demos), 2012)

Evaluating SPARQL-to-SQL Translation in Ontop. - Mariano Rodriguez-Muro; Martín Rezk; Josef Hardi; Mindaugas Slusnys; Timea Bagosi; Diego Calvanese (ORE, 2013)

The Ontop Framework for Ontology Based Data Access. - Timea Bagosi; Diego Calvanese; Josef Hardi; Sarah Komla-Ebri; Davide Lanti; Martin Rezk; Mariano Rodriguez-Muro; Mindaugas Slusnys; Guohui Xiao 001 (CSWS, 2014)

Embracing Semantic Technology for Better Metadata Authoring in Biomedicine. - Attila L. Egyedi; Martin J. O'Connor; Marcos Martínez Romero; Debra Willrett; Josef Hardi; John B. Graybeal; Mark A. Musen (SWAT4LS, 2017)

Using semantic technologies to enhance metadata submissions to public repositories in biomedicine. - Attila L. Egyedi; Martin J. O'Connor; Marcos Martínez Romero; Debra Willrett; Josef Hardi; John B. Graybeal; Mark A. Musen (SWAT4LS, 2018)

Unleashing the value of Common Data Elements through the CEDAR Workbench. - Martin J. O'Connor; Denise B. Warzel; Marcos Martínez Romero; Josef Hardi; Debra Willrett; Aras Efekhari; John B. Graybeal; Mark A. Musen (AMIA, 2019)

Using association rule mining and ontologies to generate metadata recommendations from multiple biomedical databases. - Marcos Martínez Romero; Martin J. O'Connor; Attila L. Egyedi; Debra Willrett; Josef Hardi; John B. Graybeal; Mark A. Musen (Database J. Biol. Databases Curation, 2019)

Modeling community standards for metadata as templates makes data FAIR. - Mark A. Musen; Martin J. O'Connor; Erik Schultes; Marcos Martínez Romero; Josef Hardi; John B. Graybeal (CoRR, 2022)

Tables for "Specimen, biological structure, and spatial ontologies in support of a Human Reference Atlas". - Bruce William Herr II; Josef Hardi; Ellen M. Quardokus; Andreas Bueckle; Anita R. Caron; Lu Chen; Fusheng Wang 001; David Osumi-Sutherland; Mark A. Musen; Katy Börner (Zenodo, 2022)

Tables for "Specimen, biological structure, and spatial ontologies in support of a Human Reference Atlas". - Bruce William Herr II; Josef Hardi; Ellen M. Quardokus; Andreas Bueckle; Anita R. Caron; Lu Chen; Fusheng Wang 001; David Osumi-Sutherland; Mark A. Musen; Katy Börner (Zenodo, 2022)

Tables for "Specimen, biological structure, and spatial ontologies in support of a Human Reference Atlas". - Bruce William Herr II; Josef Hardi; Ellen M. Quardokus; Andreas Bueckle; Anita R. Caron; Lu Chen; Fusheng Wang 001; David Osumi-Sutherland; Mark A. Musen; Katy Börner (Zenodo, 2022)

A Comprehensive Approach to Ensuring Quality in Spreadsheet-Based Metadata. - Martin J. O'Connor; Marcos Martínez Romero; Mete Ugur Akdogan; Josef Hardi; Mark A. Musen (CoRR, 2023)

The scalable precision medicine open knowledge engine (SPOKE): a massive knowledge graph of biomedical information. - John H. Morris; Karthik Soman; Rabia E. Akbas; Xiaoyuan Zhou; Brett Smith; Elaine C. Meng; Conrad C. Huang; Gabriel Cerono; Gundolf Schenk; Angela Rizk-Jackson; Adil Harroud; Lauren M. Sanders; et al. (Bioinform., 2023)

Ensuring Adherence to Standards in Experiment-Related Metadata Entered Via Spreadsheets. - Martin J. O'Connor; Josef Hardi; Marcos Martínez Romero; Sowmya Somasundaram; Brendan Honick; Stephen A. Fisher; Ajay Pillai; Mark A. Musen (CoRR, 2024)

Knowledge engineering for open science: Building and deploying knowledge bases for metadata standards. - Mark A. Musen; Martin J. O'Connor; Josef Hardi; Marcos Martínez Romero (CoRR, 2025)