On Direct Comparing of Medical Guidelines with Electronic Health Record. - Jana Zvárová; Arnost Veselý; Petr Hanzlícek; Josef Spidlen; David Buchtela (International Conference on Computational Science, 2004)

Obstacles to Implementing an Execution Engine for Clinical Guidelines Formalized in GLIF. - Petr Kolesa; Josef Spidlen; Jana Zvárová (MIE, 2005)

User interface of MUDR electronic health record. - Petr Hanzlícek; Josef Spidlen; Helena Heroutová; Miroslav Nagy (Int. J. Medical Informatics, 2005)

Flexible information storage in MUDRII EHR. - Josef Spidlen; Petr Hanzlícek; Antonín Ríha; Jana Zvárová (Int. J. Medical Informatics, 2006)

flowCore: a Bioconductor package for high throughput flow cytometry. - Florian Hahne; Nolwenn LeMeur; Ryan Remy Brinkman; Byron Ellis; Perry Haaland; Deepayan Sarkar; Josef Spidlen; Errol Strain; Robert Gentleman (BMC Bioinform., 2009)

FuGEFlow: data model and markup language for flow cytometry. - Yu Qian; Olga Tchuvatkina; Josef Spidlen; Peter Wilkinson; Maura Gasparetto; Andrew R. Jones; Frank J. Manion; Richard H. Scheuermann; Rafick-Pierre Sekaly; Ryan Remy Brinkman (BMC Bioinform., 2009)

Flow Cytometry Bioinformatics. - Kieran O'Neill; Nima Aghaeepour; Josef Spidlen; Ryan Remy Brinkman (PLoS Comput. Biol., 2013)

GenePattern Flow Cytometry Suite. - Josef Spidlen; Aaron Barsky; Karin Breuer; Peter Carr 004; Marc-Danie Nazaire; Barbara A. Hill; Yu Qian; Ted Liefeld; Michael Reich; Jill P. Mesirov; Peter Wilkinson; Richard H. Scheuermann; et al. (Source Code Biol. Medicine, 2013)