PTSD Biomarker Database: deep dive metadatabase for PTSD biomarkers, visualizations and analysis tools. - Daniel Domingo-Fernández; Allison Provost; Alpha Tom Kodamullil; Josep Marín-Llaó; Heather Lasseter; Kristophe Diaz; Nikolaos P. Daskalakis; Lee Lancashire; Martin Hofmann-Apitius; Magali Haas (Database J. Biol. Databases Curation, 2019)

PathMe: merging and exploring mechanistic pathway knowledge. - Daniel Domingo-Fernández; Sarah Mubeen; Josep Marín-Llaó; Charles Tapley Hoyt; Martin Hofmann-Apitius (BMC Bioinform., 2019)

MultiPaths: a Python framework for analyzing multi-layer biological networks using diffusion algorithms. - Josep Marín-Llaó; Sarah Mubeen; Alexandre Perera-Lluna; Martin Hofmann-Apitius; Sergio Picart-Armada; Daniel Domingo-Fernández (Bioinform., 2021)