Statistical Estimation of Statistical Mechanical Models: Helix-Coil Theory and Peptide Helicity Prediction. - Scott C. Schmidler; Joseph E. Lucas; Terrence G. Oas (J. Comput. Biol., 2007)

Bayesian Inference of the Number of Factors in Gene-Expression Analysis: Application to Human Virus Challenge Studies. - Bo Chen 001; Minhua Chen; John W. Paisley; Aimee K. Zaas; Christopher W. Woods; Geoffrey S. Ginsburg; Alfred O. Hero III; Joseph E. Lucas; David B. Dunson; Lawrence Carin (BMC Bioinform., 2010)

Latent Factor Analysis to Discover Pathway-Associated Putative Segmental Aneuploidies in Human Cancers. - Joseph E. Lucas; Hsiu-Ni Kung; Jen-Tsan A. Chi (PLoS Comput. Biol., 2010)

Sticky hidden Markov modeling of comparative genomic hybridization. - Lan Du 001; Minhua Chen; Joseph E. Lucas; Lawrence Carin (IEEE Trans. Signal Process., 2010)

SIGNATURE: A workbench for gene expression signature analysis. - Jeffrey T. Chang; Michael L. Gatza; Joseph E. Lucas; William T. Barry; Peyton Vaughn; Joseph Nevins (BMC Bioinform., 2011)

Detection of Viruses Via Statistical Gene Expression Analysis. - Minhua Chen; David E. Carlson; Aimee K. Zaas; Christopher W. Woods; Geoffrey S. Ginsburg; Alfred O. Hero III; Joseph E. Lucas; Lawrence Carin (IEEE Trans. Biomed. Eng., 2011)

Hierarchical factor modeling of proteomics data. - Ricardo Henao; J. Will Thompson; M. Arthur Moseley; Geoffrey S. Ginsburg; Lawrence Carin; Joseph E. Lucas (ICCABS, 2012)

Metaprotein expression modeling for label-free quantitative proteomics. - Joseph E. Lucas; J. Will Thompson; Laura G. Dubois; Jeanette McCarthy; Hans Tillmann; Alexander Thompson; Norah Shire; Ron Hendrickson; Francisco Dieguez; Phyllis Goldman; Kathleen Schwarz; Keyur Patel; et al. (BMC Bioinform., 2012)

High Dimensional Longitudinal Genomic Data: An analysis used for monitoring viral infections. - Lawrence Carin; Alfred O. Hero III; Joseph E. Lucas; David B. Dunson; Minhua Chen; Ricardo Henao; Arnau Tibau Puig; Aimee K. Zaas; Christopher W. Woods; Geoffrey S. Ginsburg (IEEE Signal Process. Mag., 2012)

Patient Clustering with Uncoded Text in Electronic Medical Records. - Ricardo Henao; Jared Murray; Geoffrey S. Ginsburg; Lawrence Carin; Joseph E. Lucas (AMIA, 2013)

A flexible statistical model for alignment of label-free proteomics data - incorporating ion mobility and product ion information. - Ashlee M. Benjamin; J. Will Thompson; Erik J. Soderblom; Scott J. Geromanos; Ricardo Henao; Virginia B. Kraus; M. Arthur Moseley; Joseph E. Lucas (BMC Bioinform., 2013)

Bayesian joint analysis of heterogeneous genomics data. - Priyadip Ray; Lingling Zheng; Joseph E. Lucas; Lawrence Carin (Bioinform., 2014)

A Multitask Point Process Predictive Model. - Wenzhao Lian; Ricardo Henao; Vinayak A. Rao; Joseph E. Lucas; Lawrence Carin (ICML, 2015)

Electronic Health Record Analysis via Deep Poisson Factor Models. - Ricardo Henao; James Lu; Joseph E. Lucas; Jeffrey M. Ferranti; Lawrence Carin (J. Mach. Learn. Res., 2016)

Assessing electronic health record phenotypes against gold-standard diagnostic criteria for diabetes mellitus. - Susan E. Spratt; Katherine Pereira; Bradi B. Granger; Bryan C. Batch; Matthew Phelan; Michael J. Pencina; Marie Lynn Miranda; L. Ebony Boulware; Joseph E. Lucas; Charlotte L. Nelson; Benjamin Neely; Benjamin Alan Goldstein; et al. (J. Am. Medical Informatics Assoc., 2017)

Development and validation of an electronic medical record (EMR)-based computed phenotype of HIV-1 infection. - Devon W. Paul; Nigel B. Neely; Meredith Clement; Isaretta L. Riley; Mashael Al-Hegelan; Matthew Phelan; Monica Kraft; David M. Murdoch; Joseph E. Lucas; John Bartlett; Mehri McKellar; Loretta G. Que (J. Am. Medical Informatics Assoc., 2018)