2D and 3D QSAR studies of diarylpyrimidine HIV-1 reverse transcriptase inhibitors. - Joseph Rebehmed; Florent Barbault; Cátia Teixeira; François Maurel (J. Comput. Aided Mol. Des., 2008)

PTM-SD: a database of structurally resolved and annotated posttranslational modifications in proteins. - Pierrick Craveur; Joseph Rebehmed; Alexandre G. de Brevern (Database J. Biol. Databases Curation, 2014)

iPBAvizu: a PyMOL plugin for an efficient 3D protein structure superimposition approach. - Guilhem Faure; Agnel Praveen Joseph; Pierrick Craveur; Tarun J. Narwani; Narayanaswamy Srinivasan; Jean-Christophe Gelly; Joseph Rebehmed; Alexandre G. de Brevern (Source Code Biol. Medicine, 2019)

Shaking the β-Bulges. - Pierrick Craveur; Tarun J. Narwani; Narayanaswamy Srinivasan; Jean-Christophe Gelly; Joseph Rebehmed; Alexandre G. de Brevern (IEEE ACM Trans. Comput. Biol. Bioinform., 2022)