Common neighbours and the local-community-paradigm for topological link prediction in bipartite networks. - Simone Daminelli; Josephine Maria Thomas; Claudio Durán; Carlo Vittorio Cannistraci (CoRR, 2015)

Machine learning meets network science: dimensionality reduction for fast and efficient embedding of networks in the hyperbolic space. - Josephine Maria Thomas; Alessandro Muscoloni; Sara Ciucci; Ginestra Bianconi; Carlo Vittorio Cannistraci (CoRR, 2016)

Complex network embedding in the hyperbolic space using non-linear unsupervised machine learning techniques. - Josephine Maria Thomas (2017)

Pioneering topological methods for network-based drug-target prediction by exploiting a brain-network self-organization theory. - Claudio Durán; Simone Daminelli; Josephine Maria Thomas; V. Joachim Haupt; Michael Schroeder 001; Carlo Vittorio Cannistraci (Briefings Bioinform., 2018)

Graph type expressivity and transformations. - Josephine M. Thomas; Silvia Beddar-Wiesing; Alice Moallemy-Oureh; Rüdiger Nather (CoRR, 2021)

FDGNN: Fully Dynamic Graph Neural Network. - Alice Moallemy-Oureh; Silvia Beddar-Wiesing; Rüdiger Nather; Josephine M. Thomas (CoRR, 2022)

Graph Neural Networks Designed for Different Graph Types: A Survey. - Josephine Maria Thomas; Alice Moallemy-Oureh; Silvia Beddar-Wiesing; Clara Holzhüter (Trans. Mach. Learn. Res., 2023)

Graph Reinforcement Learning in Power Grids: A Survey. - Mohamed Hassouna; Clara Holzhüter; Pawel Lytaev; Josephine M. Thomas; Bernhard Sick; Christoph Scholz 001 (CoRR, 2024)

Weisfeiler-Lehman goes dynamic: An analysis of the expressive power of Graph Neural Networks for attributed and dynamic graphs. - Silvia Beddar-Wiesing; Giuseppe Alessio D'Inverno; Caterina Graziani; Veronica Lachi; Alice Moallemy-Oureh; Franco Scarselli; Josephine Maria Thomas (Neural Networks, 2024)

Flow-Attentional Graph Neural Networks. - Pascal Plettenberg; Dominik Köhler; Bernhard Sick; Josephine M. Thomas (CoRR, 2025)

Graph Neural Networks for Automatic Addition of Optimizing Components in Printed Circuit Board Schematics. - Pascal Plettenberg; André Alcalde; Bernhard Sick; Josephine M. Thomas (CoRR, 2025)

Absolute Evaluation Measures for Machine Learning: A Survey. - Silvia Beddar-Wiesing; Alice Moallemy-Oureh; Marie Kempkes; Josephine M. Thomas (CoRR, 2025)