Drug-Lab Triggers Have Potential to Prevent Adverse Drug Events in Outpatients. - Josh F. Peterson; Deborah H. Williams; Andy Seger; Tejal K. Gandhi; David W. Bates (AMIA, 2001)

Gerios: Recommending Drugs and Dosing for Elderly Patients. - Josh F. Peterson; David W. Bates; Minal Patel; Jerry Avorn; Gilad J. Kuperman (AMIA, 2002)

Poster Abstract: Electronically Screening Discharge Summaries for Adverse Medical Events. - Harvey J. Murff; Alan J. Forster; Josh F. Peterson; Julie M. Fiskio; Heather L. Heiman; David W. Bates (J. Am. Medical Informatics Assoc., 2002)

Poster Abstract: Drug-Lab Triggers Have Potential to Prevent Adverse Drug Events in Outpatients. - Josh F. Peterson; Deborah H. Williams; Andrew C. Seger; Tejal K. Gandhi; David W. Bates (J. Am. Medical Informatics Assoc., 2002)

Adequacy of representation of the National Drug File Reference Terminology Physiologic Effects reference hierarchy for commonly prescribed medications. - S. Trent Rosenbloom; Joseph Awad; Theodore Speroff; Peter L. Elkin; Russell L. Rothman; Anderson Spickard III; Josh F. Peterson; Brent A. Bauer; Dietlind Wahner-Roedler; Mark Lee; William M. Gregg; Kevin B. Johnson; et al. (AMIA, 2003)

Research Paper: Electronically Screening Discharge Summaries for Adverse Medical Events. - Harvey J. Murff; Alan J. Forster; Josh F. Peterson; Julie M. Fiskio; Heather L. Heiman; David W. Bates (J. Am. Medical Informatics Assoc., 2003)

Identifying UMLS concepts from ECG Impressions using Knowledge Map. - Joshua C. Denny; Anderson Spickard III; Randolph A. Miller; Jonathan S. Schildcrout; Dawood Darbar; S. Trent Rosenbloom; Josh F. Peterson (AMIA, 2005)

Measuring the Quality of Medication Administration. - Fern FitzHenry; Josh F. Peterson; Mark Arrieta; Randolph A. Miller (AMIA, 2005)

Identifying QT prolongation from ECG impressions using Natural Language Processing and Negation Detection. - Joshua C. Denny; Josh F. Peterson (MedInfo, 2007)

Physicians' Response to Guided Geriatric Dosing: Initial Results from a Randomized Trial. - Josh F. Peterson; Benjamin P. Rosenbaum; Lemuel R. Waitman; Ralf Habermann; James S. Powers; Debbie Harrell; Randolph A. Miller (MedInfo, 2007)

Research Paper: Medication Administration Discrepancies Persist Despite Electronic Ordering. - Fern FitzHenry; Josh F. Peterson; Mark Arrieta; Lemuel R. Waitman; Jonathan S. Schildcrout; Randolph A. Miller (J. Am. Medical Informatics Assoc., 2007)

Development of a Natural Language Processing System to Identify Timing and Status of Colonoscopy Testing in Electronic Medical Records. - Joshua C. Denny; Josh F. Peterson; Neesha N. Choma; Hua Xu 001; Randolph A. Miller; Lisa Bastarache; Neeraja B. Peterson (AMIA, 2009)

Identifying QT prolongation from ECG impressions using a general-purpose Natural Language Processor. - Joshua C. Denny; Randolph A. Miller; Lemuel R. Waitman; Mark Arrieta; Josh F. Peterson (Int. J. Medical Informatics, 2009)

Research Paper: Evaluation of a Method to Identify and Categorize Section Headers in Clinical Documents. - Joshua C. Denny; Anderson Spickard III; Kevin B. Johnson; Neeraja B. Peterson; Josh F. Peterson; Randolph A. Miller (J. Am. Medical Informatics Assoc., 2009)

Extracting timing and status descriptors for colonoscopy testing from electronic medical records. - Joshua C. Denny; Josh F. Peterson; Neesha N. Choma; Hua Xu 001; Randolph A. Miller; Lisa Bastarache; Neeraja B. Peterson (J. Am. Medical Informatics Assoc., 2010)

Focus on health information technology, electronic health records and their financial impact: A framework for evaluating the appropriateness of clinical decision support alerts and responses. - Allison B. McCoy; Lemuel R. Waitman; Julia B. Lewis; Julie A. Wright; David P. Choma; Randolph A. Miller; Josh F. Peterson (J. Am. Medical Informatics Assoc., 2012)

Analyzing the Impact of Pharmacogenomics on Clinical Practice: A Visual Method. - Ioana Danciu; Josh F. Peterson (AMIA, 2013)

Establishing the Need for Personalized Medicine: Simvastatin Exposure Among a SLCO1B1 Variant Population. - Laura K. Wiley; Josh F. Peterson; Joshua C. Denny; William S. Bush (AMIA, 2013)

A Template for Authoring and Adapting Genomic Medicine Content in the eMERGE Infobutton Project. - Casey L. Overby; Luke V. Rasmussen; Andrea L. Hartzler; John J. Connolly; Josh F. Peterson; RoseMary Hedberg; Robert R. Freimuth; Brian H. Shirts; Joshua C. Denny; Eric B. Larson; Christopher G. Chute; Gail P. Jarvik; et al. (AMIA, 2014)

Public Implementation Resources for Genomic Medicine. - Josh F. Peterson; Marc S. Williams; Casey L. Overby; Robert R. Freimuth; Iftikhar J. Kullo (AMIA, 2015)

National Veterans Health Administration inpatient risk stratification models for hospital-acquired acute kidney injury. - Robert M. Cronin; Jacob P. VanHouten; Edward D. Siew; Svetlana K. Eden; Stephan D. Fihn; Christopher D. Nielson; Josh F. Peterson; Clifton R. Baker; T. Alp Ikizler; Theodore Speroff; Michael E. Matheny (J. Am. Medical Informatics Assoc., 2015)

CSER and eMERGE: current and potential state of the display of genetic information in the electronic health record. - Brian H. Shirts; Joseph S. Salama; Samuel J. Aronson; Wendy K. Chung; Stacy W. Gray; Lucia A. Hindorff; Gail P. Jarvik; Sharon E. Plon; Elena M. Stoffel; Peter Tarczy-Hornoch; Eliezer M. Van Allen; Karen E. Weck; et al. (J. Am. Medical Informatics Assoc., 2015)

Implementing Pharmacogenomic Clinical Decision Support: Design and Prescriber Response in the eMERGE Network. - Timothy M. Herr; Josh F. Peterson; Luke V. Rasmussen; Pedro J. Caraballo (AMIA, 2016)

The Clinical Pharmacogenetics Implementation Consortium (CPIC) Term Standardization for Clinical Pharmacogenetic Test Results: Alleles and Phenotypes. - James M. Hoffman; Henry M. Dunnenberger; Jonathan D. Burlison; Michelle Whirl Carrillo; Robert R. Freimuth; Marc S. Williams; Stuart A. Scott; Josh F. Peterson; Heidi L. Rehm; Teri E. Klein; Mary V. Relling; Kelly E. Caudle (CRI, 2016)

Evaluating Physician Response to Pharmacogenomic-Guided Warfarin Dosing in an Hospitalized Population. - Laura K. Wiley; Marc Beller; Julie Field; Josh F. Peterson; Joshua C. Denny (CRI, 2016)

Developing knowledge resources to support precision medicine: principles from the Clinical Pharmacogenetics Implementation Consortium (CPIC). - James M. Hoffman; Henry M. Dunnenberger; J. Kevin Hicks; Kelly E. Caudle; Michelle Whirl Carrillo; Robert R. Freimuth; Marc S. Williams; Teri E. Klein; Josh F. Peterson (J. Am. Medical Informatics Assoc., 2016)

Strategies for Equitable Pharmacogenomic-Guided Warfarin Dosing Among European and African American Individuals in a Clinical Population. - Laura K. Wiley; Jacob P. VanHouten; David Samuels; Melinda Aldrich; Dan M. Roden; Josh F. Peterson; Joshua C. Denny (PSB, 2017)

Preemptive Clinical Decision Support: Delivering Precise Information Clinicians Will Actually Use to Prevent Harm. - James M. Hoffman; Josh F. Peterson; Naveen Muthu; Henry M. Dunnenberger (AMIA, 2018)

Development and Implementation of Genomic Data Pipelines within US institutions: A pilot multi-site survey among NHGRI's IGNITE Genomic Medicine Sites. - Josh F. Peterson; Henry H. Ong; Julie A. Lynch; J. Kevin Hicks; Paul R. Dexter (AMIA, 2018)

EHR Extraction of Longitudinal Exposure to Proton Pump Inhibitors. - Andrea H. Ramirez; Elliot M. Fielstein; QiPing Feng; Henry H. Ong; Jonathan S. Schildcrout; Yaping Shi; Joshua C. Denny; Josh F. Peterson (AMIA, 2018)

Empowering genomic medicine by establishing critical sequencing result data flows: the eMERGE example. - Samuel J. Aronson; Lawrence J. Babb; Darren C. Ames; Richard A. Gibbs; Eric Venner; John J. Connelly; Keith Marsolo; Chunhua Weng; Marc S. Williams; Andrea L. Hartzler; Wayne H. Liang; James D. Ralston; et al. (J. Am. Medical Informatics Assoc., 2018)

Development of a Genomic Data Flow Framework: Results of a Survey Administered to NIH-NHGRI IGNITE and eMERGE Consortia Participants. - Paul R. Dexter; Henry H. Ong; Amanda Elsey; Gillian Bell; Nephi Walton; Wendy K. Chung; Luke V. Rasmussen; J. Kevin Hicks; Aniwaa Owusu-obeng; Stuart A. Scott; Stephen B. Ellis; Josh F. Peterson (AMIA, 2019)

Extracting Drug Exposure Epochs and Drug Response Outcomes from Electronic Health Records. - Andrea H. Ramirez; Yaping Shi; Elliot M. Fielstein; Jonathan S. Schildcrout; Henry H. Ong; Joshua C. Denny; Josh F. Peterson (AMIA, 2019)

Pharmacogenomic clinical decision support design and multi-site process outcomes analysis in the eMERGE Network. - Timothy M. Herr; Josh F. Peterson; Luke V. Rasmussen; Pedro J. Caraballo; Peggy L. Peissig; Justin B. Starren (J. Am. Medical Informatics Assoc., 2019)

Using Genomic Association Replication Rates as an EHR Quality Measure via the Phenotype-Genotype Reference Map (PGRM). - Sarah DeLozier; Josh F. Peterson; Joshua C. Denny; Lisa Bastarache (AMIA, 2021)

Mapping the Read2/CTV3 controlled clinical terminologies to Phecodes in UK Biobank primary care electronic health records: implementation and evaluation. - Spiros C. Denaxas; Ge Liu; QiPing Feng; Ghazaleh Fatemifar; Lisa Bastarache; Vern Eric Kerchberger; Aroon D. Hingorani; R. Tom Lumbers; Josh F. Peterson; Wei-Qi Wei; Harry Hemingway (AMIA, 2021)

Infobuttons for Genomic Medicine: Requirements and Barriers. - Luke V. Rasmussen; John J. Connolly; Guilherme Del Fiol; Robert R. Freimuth; Douglas B. Pet; Josh F. Peterson; Brian H. Shirts; Justin B. Starren; Marc S. Williams; Nephi Walton; Casey Overby Taylor (Appl. Clin. Inform., 2021)

Phenotyping coronavirus disease 2019 during a global health pandemic: Lessons learned from the characterization of an early cohort. - Sarah DeLozier; Sarah Bland; Melissa McPheeters; Quinn Stanton Wells; Eric Farber-Eger; Cosmin Adrian Bejan; Daniel Fabbri; S. Trent Rosenbloom; Dan M. Roden; Kevin B. Johnson; Wei-Qi Wei; Josh F. Peterson; et al. (J. Biomed. Informatics, 2021)

ConceptWAS: A high-throughput method for early identification of COVID-19 presenting symptoms and characteristics from clinical notes. - Juan Zhao 003; Monika E. Grabowska; Vern Eric Kerchberger; Joshua C. Smith; H. Nur Eken; QiPing Feng; Josh F. Peterson; S. Trent Rosenbloom; Kevin B. Johnson; Wei-Qi Wei (J. Biomed. Informatics, 2021)

A retrospective approach to evaluating potential adverse outcomes associated with delay of procedures for cardiovascular and cancer-related diagnoses in the context of COVID-19. - Neil S. Zheng; Jeremy L. Warner; Travis J. Osterman; Quinn Stanton Wells; Xiao-Ou Shu; Stephen A. Deppen; Seth J. Karp; Shon Dwyer; QiPing Feng; Nancy J. Cox; Josh F. Peterson; C. Michael Stein; et al. (J. Biomed. Informatics, 2021)

High-throughput assessment of genomic outcomes: development and validation of the HI-TAG knowledgebase. - Jodell E. Linder; Ran Tao; Ni Ketut Wilmayani; Marc S. Williams; Josh F. Peterson (AMIA, 2022)

Scanning the medical phenome to identify new diagnoses after recovery from COVID-19 in a US cohort. - Vern Eric Kerchberger; Josh F. Peterson; Wei-Qi Wei (J. Am. Medical Informatics Assoc., 2023)

Evaluating and mitigating bias in machine learning models for cardiovascular disease prediction. - Fuchen Li; Patrick Wu; Henry H. Ong; Josh F. Peterson; Wei-Qi Wei; Juan Zhao 003 (J. Biomed. Informatics, 2023)

Leveraging explainable artificial intelligence to optimize clinical decision support. - Siru Liu; Allison B. McCoy; Josh F. Peterson; Thomas A Lasko; Dean F. Sittig; Scott D. Nelson; Jennifer Andrews; Lorraine Patterson; Cheryl M. Cobb; David Mulherin; Colleen T. Morton; Adam Wright (J. Am. Medical Informatics Assoc., 2024)

Leveraging large language models for generating responses to patient messages - a subjective analysis. - Siru Liu; Allison B. McCoy; Aileen P. Wright; Babatunde Carew; Julian Z. Genkins; Sean S. Huang; Josh F. Peterson; Bryan D. Steitz; Adam Wright (J. Am. Medical Informatics Assoc., 2024)

Using large language model to guide patients to create efficient and comprehensive clinical care message. - Siru Liu; Aileen P. Wright; Allison B. McCoy; Sean S. Huang; Julian Z. Genkins; Josh F. Peterson; Yaa A. Kumah-Crystal; William Martinez; Babatunde Carew; Dara Mize; Bryan D. Steitz; Adam Wright (J. Am. Medical Informatics Assoc., 2024)

Large language models facilitate the generation of electronic health record phenotyping algorithms. - Chao Yan 004; Henry H. Ong; Monika E. Grabowska; Matthew S. Krantz; Wu-Chen Su; Alyson L. Dickson; Josh F. Peterson; QiPing Feng; Dan M. Roden; C. Michael Stein; Vern Eric Kerchberger; Bradley A. Malin; et al. (J. Am. Medical Informatics Assoc., 2024)

Leveraging generative AI to prioritize drug repurposing candidates for Alzheimer's disease with real-world clinical validation. - Chao Yan 004; Monika E. Grabowska; Alyson L. Dickson; Bingshan Li; Zhexing Wen; Dan M. Roden; C. Michael Stein; Peter J. Embí; Josh F. Peterson; QiPing Feng; Bradley A. Malin; Wei-Qi Wei (npj Digit. Medicine, 2024)