Structured Literature Image Finder: Extracting Information from Text and Images in Biomedical Literature. - Luís Pedro Coelho; Amr Ahmed 001; Andrew Arnold; Joshua D. Kangas; Abdul-Saboor Sheikh; Eric P. Xing; William W. Cohen; Robert F. Murphy (BioLINK@ISMB/ECCB, 2008)

Principles of Bioimage Informatics: Focus on Machine Learning of Cell Patterns. - Luís Pedro Coelho; Estelle Glory-Afshar; Joshua D. Kangas; Shannon Quinn; Aabid Shariff; Robert F. Murphy (BioLINK@ISMB/ECCB, 2008)

Structured literature image finder: Parsing text and figures in biomedical literature. - Amr Ahmed 001; Andrew Arnold; Luís Pedro Coelho; Joshua D. Kangas; Abdul-Saboor Sheikh; Eric P. Xing; William W. Cohen; Robert F. Murphy (J. Web Semant., 2010)

Determining the subcellular location of new proteins from microscope images using local features. - Luís Pedro Coelho; Joshua D. Kangas; Armaghan W. Naik; Elvira Osuna-Highley; Estelle Glory-Afshar; Margaret Fuhrman; Ramanuja Simha; Peter B. Berget; Jonathan W. Jarvik; Robert F. Murphy (Bioinform., 2013)

Efficient discovery of responses of proteins to compounds using active learning. - Joshua D. Kangas; Armaghan W. Naik; Robert F. Murphy (BMC Bioinform., 2014)

10 simple rules for teaching wet-lab experimentation to computational biology students, i.e., turning computer mice into lab rats. - Joseph C. Ayoob; Joshua D. Kangas (PLoS Comput. Biol., 2020)