Mapping gene expression quantitative trait loci by singular value decomposition and independent component analysis. - Shameek Biswas; John D. Storey; Joshua M. Akey (BMC Bioinform., 2008)

Implications of localized charge for human influenza A H1N1 hemagglutinin evolution: Insights from deep mutational scans. - Chadi M. Saad-Roy; Nimalan Arinaminpathy; Ned S. Wingreen; Simon A. Levin; Joshua M. Akey; Bryan T. Grenfell (PLoS Comput. Biol., 2020)