OpenAWSEM with Open3SPN2: A fast, flexible, and accessible framework for large-scale coarse-grained biomolecular simulations. - Wei Lu; Carlos Bueno; Nicholas P. Schafer; Joshua Moller; Shikai Jin; Xun Chen; Mingchen Chen; Xinyu Gu; Aram Davtyan; Juan J. de Pablo; Peter G. Wolynes (PLoS Comput. Biol., 2021)

Guided Generation for Developable Antibodies. - Siqi Zhao; Joshua Moller; Porfi Quintero-Cadena; Lood van Niekerk (CoRR, 2025)