A flexible framework for Web interfaces to image databases: supporting user-defined ontologies and links to external databases. - Josiah Johnston; Arpun Nagaraja; Harry Hochheiser; Ilya G. Goldberg (ISBI, 2006)

Pattern recognition approaches to compute image similarities: application to age related morphological change. - Nikita Orlov; Josiah Johnston; Tomasz J. Macura; Catherine A. Wolkow; Ilya G. Goldberg (ISBI, 2006)

WND-CHARM: Multi-purpose image classification using compound image transforms. - Nikita Orlov; Lior Shamir; Tomasz J. Macura; Josiah Johnston; D. Mark Eckley; Ilya G. Goldberg (Pattern Recognit. Lett., 2008)

Wndchrm - an open source utility for biological image analysis. - Lior Shamir; Nikita Orlov; D. Mark Eckley; Tomasz J. Macura; Josiah Johnston; Ilya G. Goldberg (Source Code Biol. Medicine, 2008)

Switch 2.0: A modern platform for planning high-renewable power systems. - Josiah Johnston; Rodrigo Henriquez-Auba; Benjamín Maluenda; Matthias Fripp (SoftwareX, 2019)