SPARK: A Framework for Multi-Scale Agent-Based Biomedical Modeling. - Alexey Solovyev; Maxim Mikheev; Leming Zhou; Joyeeta Dutta-Moscato; Cordelia Ziraldo; Gary An; Yoram Vodovotz; Qi Mi (Int. J. Agent Technol. Syst., 2010)

Parameter discovery for stochastic computational models in systems biology using Bayesian model checking. - Faraz Hussain 001; Christopher James Langmead; Qi Mi; Joyeeta Dutta-Moscato; Yoram Vodovotz; Sumit Kumar Jha 001 (ICCABS, 2014)

Automated parameter estimation for biological models using Bayesian statistical model checking. - Faraz Hussain 001; Christopher J. Langmead; Qi Mi; Joyeeta Dutta-Moscato; Yoram Vodovotz; Sumit Kumar Jha 001 (BMC Bioinform., 2015)