Gene Mapping by Haplotype Pattern Mining. - Hannu Toivonen; Paivi Onkamo; Kari Vasko; Vesa Ollikainen; Petteri Sevon; Heikki Mannila; Juha Kere (BIBE, 2000)

Genome segmentation using piecewise constant intensity models and reversible jump MCMC. - Marko Salmenkivi; Juha Kere; Heikki Mannila (ECCB, 2002)

Long-range control of expression in yeast. - Heikki Mannila; Anne Patrikainen; Jouni K. Seppänen; Juha Kere (Bioinform., 2002)

SAMstrt: statistical test for differential expression in single-cell transcriptome with spike-in normalization. - Shintaro Katayama; Virpi Töhönen; Sten Linnarsson; Juha Kere (Bioinform., 2013)

Drug Repositioning: A Machine-Learning Approach through Data Integration. - Francesco Napolitano; Yan Zhao; Vania M. Moreira; Roberto Tagliaferri; Juha Kere; Mauro D'Amato; Dario Greco (J. Cheminformatics, 2013)

Polymorphisms in the Dopamine Receptor 2 Gene Region Influence Improvements during Working Memory Training in Children and Adolescents. - Stina Söderqvist; Hans Matsson; Myriam Peyrard-Janvid; Juha Kere; Torkel Klingberg (J. Cogn. Neurosci., 2014)

A promoter-level mammalian expression atlas. - Fantom Consortium; RIKEN PMII; RIKEN CLST (DGT); Alistair R. R. Forrest; Hideya Kawaji; Michael Rehli; J. Kenneth Baillie; Michiel J. L. de Hoon; Vanja Haberle; Timo Lassmann; Ivan V. Kulakovskiy; Marina Lizio; et al. (Nat., 2014)

Guide for library design and bias correction for large-scale transcriptome studies using highly multiplexed RNAseq methods. - Shintaro Katayama; Tiina Skoog; Cilla Söderhäll; Elisabet Einarsdottir; Kaarel Krjutskov; Juha Kere (BMC Bioinform., 2019)

Children at risk for dyslexia show deficient left-hemispheric memory representations for new spoken word forms. - Anni Nora; Hanna Renvall; Miia Ronimus; Juha Kere; Heikki Lyytinen; Riitta Salmelin (NeuroImage, 2021)