Algorithms to automatically quantify the geometric similarity of anatomical surfaces - Doug M. Boyer; Yaron Lipman; Elizabeth St. Clair; Jesús Puente; Thomas A. Funkhouser; Biren A. Patel; Jukka Jernvall; Ingrid Daubechies (CoRR, 2011)

Differential tissue growth and cell adhesion alone drive early tooth morphogenesis: An ex vivo and in silico study. - Miquel Marin-Riera; Jacqueline Moustakas-Verho; Yoland Savriama; Jukka Jernvall; Isaac Salazar-Ciudad (PLoS Comput. Biol., 2018)

Modeling enamel matrix secretion in mammalian teeth. - Teemu J. Häkkinen; S. Susanna Sova; Ian J. Corfe; Leo Tjäderhane; Antti Hannukainen; Jukka Jernvall (PLoS Comput. Biol., 2019)

Mapping molar shapes on signaling pathways. - Wataru Morita; Naoki Morimoto; Jukka Jernvall (PLoS Comput. Biol., 2020)

Chromosomal neighbourhoods allow identification of organ specific changes in gene expression. - Rishi Das Roy; Outi Hallikas; Mona M. Christensen; Elodie Renvoisé; Jukka Jernvall (PLoS Comput. Biol., 2021)