Anduril 2: upgraded large-scale data integration framework. - Alejandra Cervera; Ville Rantanen; Kristian Ovaska; Marko Laakso; Javier Nuñez-Fontarnau; Amjad Alkodsi; Julia Casado; Chiara Facciotto; Antti Häkkinen; Riku Louhimo; Sirkku Karinen; Kaiyang Zhang; et al. (Bioinform., 2019)

qSNE: quadratic rate t-SNE optimizer with automatic parameter tuning for large datasets. - Antti Häkkinen; Juha Koiranen; Julia Casado; Katja Kaipio; Oskari Lehtonen; Eleonora Petrucci; Johanna Hynninen; Sakari Hietanen; Olli Carpén; Luca Pasquini; Mauro Biffoni; Rainer Lehtonen; et al. (Bioinform., 2020)

Agile workflow for interactive analysis of mass cytometry data. - Julia Casado; Oskari Lehtonen; Ville Rantanen; Katja Kaipio; Luca Pasquini; Antti Häkkinen; Elenora Petrucci; Johanna Hynninen; Sakari Hietanen; Olli Carpén; Mauro Biffoni; Anniina Färkkilä; et al. (Bioinform., 2021)