register: Registration for Exponential Family Functional Data. - Julia Wrobel (J. Open Source Softw., 2018)

Intensity warping for multisite MRI harmonization. - Julia Wrobel; M. L. Martin; Rohit Bakshi; Peter A. Calabresi; M. Elliot; David R. Roalf; Ruben C. Gur; Raquel E. Gur; Roland G. Henry; Govind Nair; Jiwon Oh; Nico Papinutto; et al. (NeuroImage, 2020)

registr 2.0: Incomplete Curve Registration for Exponential Family Functional Data. - Julia Wrobel; Alexander Bauer 003 (J. Open Source Softw., 2021)

Diurnal Physical Activity Patterns across Ages in a Large UK Based Cohort: The UK Biobank Study. - Julia Wrobel; John Muschelli; Andrew Leroux (Sensors, 2021)

A methodology of phenotyping ICU patients: high-fidelity, personalized, and interpretable phenotypes estimation. - Yanran Wang; J. N. Stroh; George Hripcsak; Cecilia C. Low Wang; Julia Wrobel; Caroline Der Nigoghossian; Tellen D. Bennett; David J. Albers (AMIA, 2022)

Quantifying and correcting slide-to-slide variation in multiplexed immunofluorescence images. - Coleman R. Harris; Eliot T. McKinley; Joseph T. Roland; Qi Liu 024; Martha J. Shrubsole; Ken S. Lau; Robert J. Coffey; Julia Wrobel; Simon N. Vandekar (Bioinform., 2022)

mxnorm: An R Package to Normalize Multiplexed Imaging Data. - Coleman R. Harris; Julia Wrobel; Simon N. Vandekar (J. Open Source Softw., 2022)

SPF: A spatial and functional data analytic approach to cell imaging data. - Thao Vu; Julia Wrobel; Benjamin G. Bitler; Erin L. Schenk; Kimberly R. Jordan; Debashis Ghosh (PLoS Comput. Biol., 2022)

A platform-independent framework for phenotyping of multiplex tissue imaging data. - Mansooreh Ahmadian; Christian Rickert; Angela Minic; Julia Wrobel; Benjamin G. Bitler; Fuyong Xing; Michael Angelo; Elena W. Y. Hsieh; Debashis Ghosh; Kimberly R. Jordan (PLoS Comput. Biol., 2023)

FunSpace: A functional and spatial analytic approach to cell imaging data using entropy measures. - Thao Vu; Souvik Seal; Tusharkanti Ghosh; Mansooreh Ahmadian; Julia Wrobel; Debashis Ghosh (PLoS Comput. Biol., 2023)

A methodology of phenotyping ICU patients from EHR data: High-fidelity, personalized, and interpretable phenotypes estimation. - Yanran Wang; J. N. Stroh; George Hripcsak; Cecilia C. Low Wang; Tellen D. Bennett; Julia Wrobel; Caroline Der Nigoghossian; Scott W. Mueller; Jan Claassen; David J. Albers (J. Biomed. Informatics, 2023)

GammaGateR: semi-automated marker gating for single-cell multiplexed imaging. - Jiangmei Xiong; Harsimran Kaur; Cody N. Heiser; Eliot T. McKinley; Joseph T. Roland; Robert J. Coffey; Martha J. Shrubsole; Julia Wrobel; Siyuan Ma; Ken S. Lau; Simon N. Vandekar (Bioinform., 2024)

Kernel machine tests of association using extrinsic and intrinsic cluster evaluation metrics. - Alexandria M. Jensen; Peter Dewitt; Brianne M. Bettcher; Julia Wrobel; Katerina J. Kechris; Debashis Ghosh (PLoS Comput. Biol., 2024)

scSpatialSIM: a simulator of spatial single-cell molecular data. - Alex C. Soupir; Julia Wrobel; Jordan H. Creed; Oscar E. Ospina; Christopher M. Wilson; Brandon J. Manley; Lauren C. Peres; Brooke L. Fridley (SoftwareX, 2025)