Neural networks for parallel contrast enhancement in medical images. - Julian Mattes; Denis Trystram; Jacques Demongeot (HPCN Europe, 1995)

Parallel Image Processing Using Neural Networks: Applications in Contrast Enhancement of Medical Images. - Julian Mattes; Denis Trystram; Jacques Demongeot (Parallel Process. Lett., 1998)

Tree Representation for Image Matching and Object Recognition. - Julian Mattes; Mathieu Richard; Jacques Demongeot (DGCI, 1999)

Tree Representation and Implicit Tree Matching for a Coarse to Fine Image Matching Algorithm. - Julian Mattes; Jacques Demongeot (MICCAI, 1999)

Efficient Algorithms to Implement the Confinement Tree. - Julian Mattes; Jacques Demongeot (DGCI, 2000)

A Point Set Registration Algorithm Using a Motion Model Based on Thin-Plate Splines and Point Clustering. - Johannes Fieres; Julian Mattes; Roland Eils (DAGM-Symposium, 2001)

An Active Contour Model for Segmentation Based on Cubic B-splines and Gradient Vector Flow. - Matthias Gebhard; Julian Mattes; Roland Eils (MICCAI, 2001)

New Tools for Visualization and Quantification in Dynamic Processes: Application to the Nuclear Envelope Dynamics During Mitosis. - Julian Mattes; Johannes Fieres; Joël Beaudouin; Daniel Gerlich; Jan Ellenberg; Roland Eils (MICCAI, 2001)

Structural outlier detection for automatic landmark extraction. - Julian Mattes; Jacques Demongeot (Image Processing, 2001)

Shape-adapted motion model based on thin-plate splines and point clustering for point set registration. - Julian Mattes; Johannes Fieres; Roland Eils (Image Processing, 2002)

A modular registration platform for multimodal image matching using ITK - first clinical application: localizing epileptogenic foci. - Helmut Kopf; Julian Mattes; Reto J. Bale; E. Donnemiller; Eugen Trinka; Rainer Schubert (CARS, 2004)

Assessing The Similarity of Spatial Configurations Using Distance Differences and Bending Energy: Application To Chromosomal Interphase Arrangements In HeLa Cell Clones. - Juntao Gao; Roland Eils; Daniela Köhler; Irina Solovei; Thomas Cremer; Julian Mattes (ISBI, 2004)

A Robust Semi-automatic Procedure for Motion Quantification of Aortic Stent Grafts Using Point Set Registration. - Julian Mattes; Iris Steingruber; Michael Netzer; Karl D. Fritscher; Helmut Kopf; Werner Jaschke; Rainer Schubert (Bildverarbeitung für die Medizin, 2006)

Analyzing motion and deformation of the cell nucleus for studying co-localizations of nuclear structures. - Julian Mattes; Janna Nawroth; Petra Boukamp; Roland Eils; Karin M. Greulich-Bode (ISBI, 2006)

Quantification of the migration and deformation of abdominal aortic aneurysm stent grafts. - Julian Mattes; Iris Steingruber; Michael Netzer; Karl D. Fritscher; Helmut Kopf; Werner Jaschke; Rainer Schubert (Image Processing, 2006)

A Maximal Mass Confinement Principle for Rigid and Locally Rigid Image Registration. - Julian Mattes; Johannes Gall; Alfredo Lopez (MICCAI (2), 2008)

3D inters-subject cardiac registration using 4D information. - Alfredo Lopez; Karl D. Fritscher; Thomas Trieb; Rainer Schubert; Julian Mattes (Image Processing, 2008)

Recursive water flow: A shape decomposition approach for cell clump splitting. - Matthias Dorfer; Julian Mattes (ISBI, 2016)

Associating approximate paths and temporal sequences of noisy detections: Application to the recovery of spatio-temporal cancer cell trajectories. - Matthias Dorfer; Tomas Kazmar; Matej Smíd; Sanchit Sing; Julia Kneißl; Simone Keller; Olivier Debeir; Birgit Luber; Julian Mattes (Medical Image Anal., 2016)

An Algorithm for Individual Intermediate Filament Tracking. - Dmytro Kotsur; Roman Yakobenchuk; Rudolf E. Leube; Reinhard Windoffer; Julian Mattes (SaMBa@MICCAI, 2018)

Supplemental Data to Submission Mattes et al. IEEE TMI 2020. - Julian Mattes; Wolfgang Fenz; Stefan Thumfart; Gerhard Haitchi; Pierre Schmit; Franz Fellner (IEEE DataPort, 2020)