Utilisation de la tessellation de Voronoï pour l'étude des complexes protéine-protéine. (Using the Voronoi tesselation for the modeling of protein-protein complexes). - Julie Bernauer (2006)

A new protein-protein docking scoring function based on interface residue properties. - Julie Bernauer; Jérôme Azé; Joël Janin; Anne Poupon (Bioinform., 2007)

DiMoVo: a Voronoi tessellation-based method for discriminating crystallographic and biological protein-protein interactions. - Julie Bernauer; Ranjit Prasad Bahadur; Francis Rodier; Joël Janin; Anne Poupon (Bioinform., 2008)

Comparing Voronoi and Laguerre Tessellations in the Protein-Protein Docking Context. - Thomas Bourquard; Julie Bernauer; Jérôme Azé; Anne Poupon (ISVD, 2009)

Session Introduction. - Samuel Flores; Julie Bernauer; Xuhui Huang; Ruhong Zhou; Seokmin Shin (Pacific Symposium on Biocomputing, 2010)

ESBTL: efficient PDB parser and data structure for the structural and geometric analysis of biological macromolecules. - Sébastien Loriot; Frédéric Cazals; Julie Bernauer (Bioinform., 2010)

Multiscale modeling of macromolecular biosystems. - Samuel Flores; Julie Bernauer; Seokmin Shin; Ruhong Zhou; Xuhui Huang (Briefings Bioinform., 2012)

Evaluating Mixture Models for Building RNA Knowledge-Based Potentials. - Adelene Y. L. Sim; Olivier Schwander; Michael Levitt 001; Julie Bernauer (J. Bioinform. Comput. Biol., 2012)

Apprentissage de fonctions de tri pour la prédiction d'interactions protéine-ARN. - Adrien Guilhot-Gaudeffroy; Jérôme Azé; Julie Bernauer; Christine Froidevaux (EGC, 2014)

Geometric and statistical methods for the analysis and prediction of structural interactions between biomolecules. (Méthodes géométriques et statistiques pour l'analyse et la prédiction des interactions structurales de biomolécules). - Julie Bernauer (2015)

KGSrna: Efficient 3D Kinematics-Based Sampling for Nucleic Acids. - Rasmus Fonseca; Henry van den Bedem; Julie Bernauer (RECOMB, 2015)

Markov State Models Reveal a Two-Step Mechanism of miRNA Loading into the Human Argonaute Protein: Selective Binding followed by Structural Re-arrangement. - Hanlun Jiang; Fu Kit Sheong; Lizhe Zhu; Xin Gao 001; Julie Bernauer; Xuhui Huang (PLoS Comput. Biol., 2015)

Probing RNA Native Conformational Ensembles with Structural Constraints. - Rasmus Fonseca; Henry van den Bedem; Julie Bernauer (J. Comput. Biol., 2016)

NVIDIA Deep Learning Tutorial. - Julie Bernauer (IPDPS, 2017)

GARN2: coarse-grained prediction of 3D structure of large RNA molecules by regret minimization. - Mélanie Boudard; Dominique Barth; Julie Bernauer; Alain Denise; Johanne Cohen (Bioinform., 2017)

Efficient large-scale language model training on GPU clusters using megatron-LM. - Deepak Narayanan; Mohammad Shoeybi; Jared Casper; Patrick LeGresley; Mostofa Patwary; Vijay Korthikanti; Dmitri Vainbrand; Prethvi Kashinkunti; Julie Bernauer; Bryan Catanzaro; Amar Phanishayee; Matei Zaharia (SC, 2021)

Efficient Large-Scale Language Model Training on GPU Clusters. - Deepak Narayanan; Mohammad Shoeybi; Jared Casper; Patrick LeGresley; Mostofa Patwary; Vijay Korthikanti; Dmitri Vainbrand; Prethvi Kashinkunti; Julie Bernauer; Bryan Catanzaro; Amar Phanishayee; Matei Zaharia (CoRR, 2021)

Using DeepSpeed and Megatron to Train Megatron-Turing NLG 530B, A Large-Scale Generative Language Model. - Shaden Smith; Mostofa Patwary; Brandon Norick; Patrick LeGresley; Samyam Rajbhandari; Jared Casper; Zhun Liu; Shrimai Prabhumoye; George Zerveas; Vijay Korthikanti; Elton Zheng; Rewon Child; et al. (CoRR, 2022)

Software-defined, programmable L1 dataplane: demonstration of fabric hardware resilience using optical switches. - Giannis Patronas; Dimitris Syrivelis; Paraskevas Bakopoulos; Prethvi Kashinkunti; Louis Capps; Nikos Argyris 002; Nikos Terzenidis; Eitan Zahavi; Luke Yeager; Elad Mentovich; Julie Bernauer (OFC, 2023)

Photonic switched networking for data centers and advanced computing systems. - Paraskevas Bakopoulos; Giannis Patronas; Nikos Terzenidis; Zsolt-Alon Wertheimer; Prethvi Kashinkunti; Dimitris Syrivelis; Eitan Zahavi; Louis Capps; Nikos Argyris 002; Luke Yeager; Julie Bernauer; Elad Mentovich (OFC, 2024)