Boost-HiC: computational enhancement of long-range contacts in chromosomal contact maps. - Leopold Carron; Jean Baptiste Morlot; Vincent Matthys; Annick Lesne; Julien Mozziconacci (Bioinform., 2019)

Genome annotation across species using deep convolutional neural networks. - Ghazaleh Khodabandelou; Etienne Routhier; Julien Mozziconacci (PeerJ Comput. Sci., 2020)

Improving distance measures between genomic tracks with mutual proximity. - Thomas Haschka; Jean Baptiste Morlot; Leopold Carron; Julien Mozziconacci (Briefings Bioinform., 2021)

MNHN-Tree-Tools: a toolbox for tree inference using multi-scale clustering of a set of sequences. - Thomas Haschka; Loïc Ponger; Christophe Escudé; Julien Mozziconacci (Bioinform., 2021)

keras_dna: a wrapper for fast implementation of deep learning models in genomics. - Etienne Routhier; Ayman Bin Kamruddin; Julien Mozziconacci (Bioinform., 2021)