Comparison of volumetric registration algorithms for tensor-based morphometry. - Julio Villalon; Anand A. Joshi; Natasha Leporé; Caroline C. Brun; Arthur W. Toga; Paul M. Thompson (ISBI, 2011)

Exploratory factor analysis of brain networks reveals sub-networks related to cognitive performance. - Kenia Martínez; Julio Villalon-Reina; Dominique Kessel; Anand A. Joshi; José Angel Pineda-Pardo; Neda Jahanshad; Talia M. Nir; Kristian M. Eschenburg; Francisco J. Román; Miguel Burgaleta; Ana Beatriz Solana; M. Ángeles Quiroga; et al. (ISBI, 2013)

Bivariate Genome-Wide Association Study of Genetically Correlated Neuroimaging Phenotypes from DTI and MRI through a Seemingly Unrelated Regression Model. - Neda Jahanshad; Priya Bhatt; Derrek P. Hibar; Julio Villalon; Talia M. Nir; Arthur W. Toga; Clifford R. Jack Jr.; Matt A. Bernstein; Michael W. Weiner; Katie McMahon; Greig I. de Zubicaray; Nicholas G. Martin; et al. (MBIA, 2013)

White matter microstructural abnormalities in girls with chromosome 22q11.2 deletion syndrome, Fragile X or Turner syndrome as evidenced by diffusion tensor imaging. - Julio Villalon-Reina; Neda Jahanshad; Elliott Beaton; Arthur W. Toga; Paul M. Thompson; Tony J. Simon (NeuroImage, 2013)

Analysis of structural brain connectivity in 6 cases of hemispherectomy. - Kristian M. Eschenburg; Julio Villalon-Reina; Neda Jahanshad; Talia M. Nir; Madelaine Daianu; Anand A. Joshi; Cassandra D. Leonardo; Stella de Bode; Susan Y. Bookheimer; Noriko Salamon; Paul M. Thompson (ISBI, 2014)

Reproducibility of brain-cognition relationships using different cortical surface-based analysis protocols. - Kenia Martínez; Anand A. Joshi; Sarah K. Madsen; Shantanu H. Joshi; Sherif Karama; Francisco J. Román; Julio Villalon-Reina; Miguel Burgaleta; Paul M. Thompson; Roberto Colom (ISBI, 2014)

Registering Cortical Surfaces Based on Whole-Brain Structural Connectivity and Continuous Connectivity Analysis. - Boris Gutman; Cassandra D. Leonardo; Neda Jahanshad; Derrek P. Hibar; Kristian M. Eschenburg; Talia M. Nir; Julio Villalon; Paul M. Thompson (MICCAI (3), 2014)

Automatic clustering and population analysis of white matter tracts using maximum density paths. - Gautam Prasad; Shantanu H. Joshi; Neda Jahanshad; Julio Villalon-Reina; Iman Aganj; Christophe Lenglet; Guillermo Sapiro; Katie L. McMahon; Greig I. de Zubicaray; Nicholas G. Martin; Margaret J. Wright; Arthur W. Toga; et al. (NeuroImage, 2014)

7T multi-shell hybrid diffusion imaging (HYDI) for mapping brain connectivity in mice. - Madelaine Daianu; Neda Jahanshad; Julio Villalon-Reina; Gautam Prasad; Russell E. Jacobs; Samuel Barnes; Berislav Zlokovic; Axel Montagne; Paul M. Thompson (Image Processing, 2015)

Diffusion tensor distribution function metrics boost power to detect deficits in Alzheimer's disease. - Talia M. Nir; Artemis Zavaliangos-Petropulu; Neda Jahanshad; Julio Villalon-Reina; Liang Zhan; Alex D. Leow; Matt A. Bernstein; Clifford R. Jack; Michael W. Weiner; Paul M. Thompson (ISBI, 2016)

Multi-modal Registration Improves Group Discrimination in Pediatric Traumatic Brain Injury. - Emily L. Dennis; Faisal Rashid; Julio Villalon-Reina; Gautam Prasad; Joshua Faskowitz; Talin Babikian; Richard Mink; Christopher Babbitt; Jeffrey Johnson; Christopher C. Giza; Robert F. Asarnow; Paul M. Thompson (BrainLes@MICCAI, 2016)

Effects of EPI distortion correction pipelines on the connectome in Parkinson's Disease. - Justin Galvis; Adam Mezher; Anjanibhargavi Ragothaman; Julio Villalon-Reina; P. Thomas Fletcher; Paul M. Thompson; Gautam Prasad (Image Processing, 2016)

Evaluating 35 Methods to Generate Structural Connectomes Using Pairwise Classification. - Dmitry Petrov; Alexander Ivanov 003; Joshua Faskowitz; Boris Gutman; Daniel Moyer; Julio Villalon; Neda Jahanshad; Paul M. Thompson (MICCAI (1), 2017)

Examination of corticothalamic fiber projections in United States service members with mild traumatic brain injury. - Faisal M. Rashid; Emily L. Dennis; Julio E. Villalon-Reina; Yan Jin 001; Jeffrey D. Lewis; Gerald E. York; Paul M. Thompson; David F. Tate (SIPAIM, 2017)

Multi-Shell Diffusion MRI Measures of Brain Aging: A Preliminary Comparison From ADNI3. - Talia M. Nir; Sophia I. Thomopoulos; Julio E. Villalon-Reina; Artemis Zavaliangos-Petropulu; Emily L. Dennis; Robert I. Reid; Matt A. Bernstein; Bret J. Borowski; Clifford R. Jack; Michael W. Weiner; Neda Jahanshad; Paul M. Thompson (ISBI, 2019)

FiberNeat: Unsupervised White Matter Tract Filtering. - Bramsh Qamar Chandio; Tamoghna Chattopadhyay; Conor Owens-Walton; Julio E. Villalon-Reina; Leila Nabulsi; Sophia I. Thomopoulos; Eleftherios Garyfallidis; Paul M. Thompson (EMBC, 2022)

The Impact of Susceptibility Distortion Correction Protocols on Adolescent Diffusion MRI Measures. - Talia M. Nir; Julio E. Villalon-Reina; Paul M. Thompson; Neda Jahanshad (CDMRI@MICCAI, 2022)

Multi-site Normative Modeling of Diffusion Tensor Imaging Metrics Using Hierarchical Bayesian Regression. - Julio E. Villalon-Reina; Clara Moreau; Talia M. Nir; Neda Jahanshad; Anne M. Maillard; David Romascano; Bogdan Draganski; Sarah Lippé; Carrie E. Bearden; Seyed Mostafa Kia; Andre F. Marquand; Sébastien Jacquemont; et al. (MICCAI (1), 2022)

Evaluating Fiber Orientation Dispersion Measures Computed From Single-Shell Diffusion MRI. - Julio E. Villalon-Reina; Talia M. Nir; Elnaz Nourollahimoghadam; Nikhil J. Dhinagar; Neda Jahanshad; Paul M. Thompson; Rafael Neto Henriques (EMBC, 2023)

BundleCleaner: Unsupervised Denoising and Subsampling of Diffusion MRI-Derived Tractography Data. - Yixue Feng 001; Bramsh Qamar Chandio; Julio E. Villalon-Reina; Sophia I. Thomopoulos; Himanshu Joshi; Gauthami Nair; Anand A. Joshi; Ganesan Venkatasubramanian; John P. John; Paul M. Thompson (CDMRI@MICCAI, 2023)

Large-scale Normative Modeling of Brain Microstructure. - Julio E. Villalon-Reina; Alyssa H. Zhu; Talia M. Nir; Sophia I. Thomopoulos; Emily Laltoo; Leila Kushan; Carrie E. Bearden; Neda Jahanshad; Paul M. Thompson (SIPAIM, 2023)

Deep Normative Tractometry for Identifying Joint White Matter Macro- and Micro-structural Abnormalities in Alzheimer's Disease. - Yixue Feng 001; Bramsh Qamar Chandio; Julio E. Villalon-Reina; Sebastian M. Benavidez; Tamoghna Chattopadhyay; Sasha Chehrzadeh; Emily Laltoo; Sophia I. Thomopoulos; Himanshu Joshi; Ganesan Venkatasubramanian; John P. John; Neda Jahanshad; et al. (EMBC, 2024)

Bundle Analytics based Data Harmonization for Multi-Site Diffusion MRI Tractometry. - Bramsh Qamar Chandio; Julio E. Villalon-Reina; Talia M. Nir; Sophia I. Thomopoulos; Yixue Feng 001; Sebastian M. Benavidez; Neda Jahanshad; Jaroslaw Harezlak; Eleftherios Garyfallidis; Paul M. Thompson (EMBC, 2024)

Brain Age Analysis and Dementia Classification using Convolutional Neural Networks trained on Diffusion MRI: Tests in Indian and North American Cohorts. - Tamoghna Chattopadhyay; Neha Ann Joshy; Saket Ozarkar; Ketaki Buwa; Yixue Feng 001; Emily Laltoo; Sophia I. Thomopoulos; Julio Villalon; Himanshu Joshi; Ganesan Venkatasubramanian; John P. John; Paul M. Thompson (EMBC, 2024)

BundleAGE: Predicting White Matter Age using Along-Tract Microstructural Profiles from Diffusion MRI. - Yixue Feng 001; Julio E. Villalon-Reina; Talia M. Nir; Bramsh Qamar Chandio; Neda Jahanshad; Paul M. Thompson (SIPAIM, 2024)

Comparison of Explainable AI Models for MRI-Based Alzheimer's Disease Classification. - Tamoghna Chattopadhyay; Neha Ann Joshy; Chirag Jagad; Emma J. Gleave; Sophia I. Thomopoulos; Yixue Feng 001; Julio E. Villalon-Reina; Emily Laltoo; Himanshu Joshi; Ganesan Venkatasubramanian; John P. John; Greg Ver Steeg; et al. (SIPAIM, 2024)