Genome Landscapes and Bacteriophage Codon Usage. - Julius B. Lucks; David R. Nelson; Grzegorz R. Kudla; Joshua B. Plotkin (PLoS Comput. Biol., 2008)

RNA structure characterization from chemical mapping experiments. - Sharon Aviran; Julius B. Lucks; Lior Pachter (Allerton, 2011)

The Stanford RNA Mapping Database for sharing and visualizing RNA structure mapping experiments - Pablo Cordero; Julius B. Lucks; Rhiju Das (CoRR, 2011)

An RNA Mapping DataBase for curating RNA structure mapping experiments. - Pablo Cordero; Julius B. Lucks; Rhiju Das (Bioinform., 2012)

DUETT quantitatively identifies known and novel events in nascent RNA structural dynamics from chemical probing data. - Albert Y. Xue; Angela M. Yu; Julius B. Lucks; Neda Bagheri (Bioinform., 2019)