Microarray blob-defect removal improves array analysis. - Jun S. Song; Kaveh Maghsoudi; Wei Li 036; Edward Fox; John Quackenbush; Xiaole Shirley Liu (Bioinform., 2007)

TeachEnG: a Teaching Engine for Genomics. - Minji Kim 007; Yeonsung Kim; Lei Qian; Jun S. Song (Bioinform., 2017)

Quantum transport senses community structure in networks. - Chenchao Zhao; Jun S. Song (CoRR, 2017)

Maximum entropy methods for extracting the learned features of deep neural networks. - Alex Finnegan; Jun S. Song (PLoS Comput. Biol., 2017)

Exact Heat Kernel on a Hypersphere and Its Applications in Kernel SVM. - Chenchao Zhao; Jun S. Song (Frontiers Appl. Math. Stat., 2018)

ClusterEnG: an interactive educational web resource for clustering and visualizing high-dimensional data. - Mohith Manjunath; Yi Zhang 055; Yeonsung Kim; Steve H. Yeo; Omar Sobh; Nathan Russell; Christian Followell; Colleen Bushell; Umberto Ravaioli; Jun S. Song (PeerJ Comput. Sci., 2018)

SequencEnG: an interactive knowledge base of sequencing techniques. - Yi Zhang 055; Mohith Manjunath; Yeonsung Kim; Joerg Heintz; Jun S. Song (Bioinform., 2019)

Spectral clustering of single-cell multi-omics data on multilayer graphs. - Shuyi Zhang; Jacob R. Leistico; Raymond J. Cho; Jeffrey B. Cheng; Jun S. Song (Bioinform., 2022)

Leveraging epigenomes and three-dimensional genome organization for interpreting regulatory variation. - Brittany Baur; Junha Shin; Jacob Schreiber; Shilu Zhang; Yi Zhang 055; Mohith Manjunath; Jun S. Song; William Stafford Noble; Sushmita Roy (PLoS Comput. Biol., 2023)