Co-community Structure in Multiple Evolving Networks - Shi-Hua Zhang; Junfei Zhao; Xiang-Sun Zhang (CoRR, 2011)

Identifying mutated core modules in glioblastoma by integrative network analysis. - Junhua Zhang 002; Shi-Hua Zhang; Yong Wang 001; Junfei Zhao; Xiang-Sun Zhang (ISB, 2012)

Efficient methods for identifying mutated driver pathways in cancer. - Junfei Zhao; Shi-Hua Zhang; Ling-Yun Wu; Xiang-Sun Zhang (Bioinform., 2012)

Inferring domain-domain interactions from protein-protein interactions in the complex network conformation. - Chen Chen; Junfei Zhao; Qiang Huang; Rui-Sheng Wang; Xiang-Sun Zhang (BMC Syst. Biol., 2012)

A Gene Gravity Model for the Evolution of Cancer Genomes: A Study of 3, 000 Cancer Genomes across 9 Cancer Types. - Feixiong Cheng; Chuang Liu; Chen-Ching Lin; Junfei Zhao; Peilin Jia; Wen-Hsiung Li; Zhongming Zhao (PLoS Comput. Biol., 2015)

SGDriver: a novel structural genomics-based approach to prioritize cancer related and potentially druggable somatic mutations. - Junfei Zhao; Feixiong Cheng; Zhongming Zhao (BMC Bioinform., 2015)

Advances in computational approaches for prioritizing driver mutations and significantly mutated genes in cancer genomes. - Feixiong Cheng; Junfei Zhao; Zhongming Zhao (Briefings Bioinform., 2016)

A network-based drug repositioning infrastructure for precision cancer medicine through targeting significantly mutated genes in the human cancer genomes. - Feixiong Cheng; Junfei Zhao; Michaela Fooksa; Zhongming Zhao (J. Am. Medical Informatics Assoc., 2016)

ccmGDB: a database for cancer cell metabolism genes. - Pora Kim; Feixiong Cheng; Junfei Zhao; Zhongming Zhao (Nucleic Acids Res., 2016)

TSGene 2.0: an updated literature-based knowledgebase for tumor suppressor genes. - Min Zhao 006; Pora Kim; Ramkrishna Mitra; Junfei Zhao; Zhongming Zhao (Nucleic Acids Res., 2016)

Systems Biology-Based Investigation of Cellular Antiviral Drug Targets Identified by Gene-Trap Insertional Mutagenesis. - Feixiong Cheng; James L. Murray; Junfei Zhao; Jinsong Sheng; Zhongming Zhao; Donald H. Rubin (PLoS Comput. Biol., 2016)

SZGR 2.0: a one-stop shop of schizophrenia candidate genes. - Peilin Jia; Guangchun Han; Junfei Zhao; Pinyi Lu; Zhongming Zhao (Nucleic Acids Res., 2017)

mutLBSgeneDB: mutated ligand binding site gene DataBase. - Pora Kim; Junfei Zhao; Pinyi Lu; Zhongming Zhao (Nucleic Acids Res., 2017)

Multi/Many-Objective Optimization Via A New Preference Indicator. - Lianbo Ma; Mingli Shi; Rui Wang 017; Shengminjie Chen; Junfei Zhao; Xiaolong Shen (CEC, 2020)

An aggregated pairwise comparison-based evolutionary algorithm for multi-objective and many-objective optimization. - Xueyi Wang; Lianbo Ma; Shujun Yang; Min Huang 001; Xingwei Wang 001; Junfei Zhao; Xiaolong Shen (Appl. Soft Comput., 2020)

Individualized genetic network analysis reveals new therapeutic vulnerabilities in 6, 700 cancer genomes. - Chuang Liu 001; Junfei Zhao; Weiqiang Lu; Yao Dai; Jennifer Hockings; Yadi Zhou; Ruth Nussinov; Charis Eng; Feixiong Cheng (PLoS Comput. Biol., 2020)

A cardiologist-like computer-aided interpretation framework to improve arrhythmia diagnosis from imbalanced training datasets. - Lianting Hu; Shuai Huang; Huazhang Liu; Yunmei Du; Junfei Zhao; Xiaoting Peng; Dantong Li; Xuanhui Chen; Huan Yang; Lingcong Kong; Jiajie Tang; Xin Li 091; et al. (Patterns, 2023)