Phrase-Pattern-based Korean to English Machine Translation using Two Level Translation Pattern Selection. - Jung-Jae Kim 001; Key-Sun Choi; Young-Soog Chae (ACL, 2000)

Bidirectional Incremental Parsing for Automatic Pathway Identification with Combinatory Categorial Grammar. - Jong C. Park; Hyun Sook Kim; Jung-Jae Kim 001 (Pacific Symposium on Biocomputing, 2001)

Annotation of Gene Products in the Literature with Gene Ontology Terms Using Syntactic Dependencies. - Jung-Jae Kim 001; Jong-Chan Park (IJCNLP, 2004)

Bioie: Retargetable Information Extraction and Ontological Annotation of Biological Interactions from the Literature. - Jung-Jae Kim 001; Jong-Chan Park (J. Bioinform. Comput. Biol., 2004)

BioContrasts: extracting and exploiting protein-protein contrastive relations from biomedical literature. - Jung-Jae Kim 001; Zhuo Zhang 001; Jong-Chan Park; See-Kiong Ng (Bioinform., 2006)

Automatic extension of Gene Ontology with flexible identification of candidate terms. - Jin-Bok Lee; Jung-Jae Kim 001; Jong-Chan Park (Bioinform., 2006)

Extracting contrastive information from negation patterns in biomedical literature. - Jung-Jae Kim 001; Jong-Chan Park (ACM Trans. Asian Lang. Inf. Process., 2006)

Ontology-based Extraction of Transcription Regulation Events. - Jung-Jae Kim 001 (Ontologies and Text Mining for Life Sciences, 2008)

Gene Regulation Ontology (GRO): Design Principles and Use Cases. - Elena Beisswanger; Vivian Lee; Jung-Jae Kim 001; Dietrich Rebholz-Schuhmann; Andrea Splendiani; Olivier Dameron; Stefan Schulz 001; Udo Hahn (MIE, 2008)

Categorization of services for seeking information in biomedical literature: a typology for improvement of practice. - Jung-Jae Kim 001; Dietrich Rebholz-Schuhmann (Briefings Bioinform., 2008)

MedEvi: Retrieving textual evidence of relations between biomedical concepts from Medline. - Jung-Jae Kim 001; Piotr Pezik; Dietrich Rebholz-Schuhmann (Bioinform., 2008)

How Feasible and Robust is the Automatic Extraction of Gene Regulation Events? A Cross-Method Evaluation under Lab and Real-Life Conditions. - Udo Hahn; Katrin Tomanek; Ekaterina Buyko; Jung-Jae Kim 001; Dietrich Rebholz-Schuhmann (BioNLP@HLT-NAACL, 2009)

A Statistical NLP Approach for Feature and Sentiment Identification from Chinese Reviews. - Zhen Hai; Kuiyu Chang; Qinbao Song; Jung-Jae Kim 001 (CIPS-SIGHAN, 2010)

Eff2Match results for OAEI 2010. - Watson Wei Khong Chua; Jung-Jae Kim 001 (OM, 2010)

Implicit Feature Identification via Co-occurrence Association Rule Mining. - Zhen Hai; Kuiyu Chang; Jung-Jae Kim 001 (CICLing (1), 2011)

Improving the extraction of complex regulatory events from scientific text by using ontology-based inference. - Jung-Jae Kim 001; Dietrich Rebholz-Schuhmann (J. Biomed. Semant., 2011)

Semantic querying over knowledge in biomedical text corpora annotated with multiple ontologies. - Watson Wei Khong Chua; Jung-Jae Kim 001 (BCB, 2012)

Hybrid pattern matching for complex ontology term recognition. - Jung-Jae Kim 001; Anh Tuan Luu (BCB, 2012)

Discovering Cross-Ontology Subsumption Relationships by Using Ontological Annotations on Biomedical Literature. - Watson Wei Khong Chua; Jung-Jae Kim 001 (ICBO, 2012)

Sentiment lexicons for health-related opinion mining. - Lorraine Goeuriot; Jin-Cheon Na; Wai Yan Min Kyaing; Christopher S. G. Khoo; Yun-Ke Chang; Yin Leng Theng; Jung-Jae Kim 001 (IHI, 2012)

BOAT: Automatic alignment of biomedical ontologies using term informativeness and candidate selection. - Watson Wei Khong Chua; Jung-Jae Kim 001 (J. Biomed. Informatics, 2012)

Automatic Suggestion for PubMed Query Reformulation. - Anh Tuan Luu; Jung-Jae Kim 001 (J. Comput. Sci. Eng., 2012)

GRO Task: Populating the Gene Regulation Ontology with events and relations. - Jung-Jae Kim 001; Xu Han 008; Vivian Lee; Dietrich Rebholz-Schuhmann (BioNLP@ACL (Shared Task), 2013)

Overview of BioNLP Shared Task 2013. - Claire Nédellec; Robert Bossy; Jin-Dong Kim; Jung-Jae Kim 001; Tomoko Ohta; Sampo Pyysalo; Pierre Zweigenbaum (BioNLP@ACL (Shared Task), 2013)

Gene Regulatory Networks from Gene Ontology. - Wenting Liu; Kuiyu Chang; Jie Zheng 002; Jain Divya; Jung-Jae Kim 001; Jagath C. Rajapakse (ISBRA, 2013)

DigSee: disease gene search engine with evidence sentences (version cancer). - Jeongkyun Kim; Seongeun So; Hee-Jin Lee; Jong-Chan Park; Jung-Jae Kim 001; Hyunju Lee (Nucleic Acids Res., 2013)

Taxonomy Construction Using Syntactic Contextual Evidence. - Anh Tuan Luu; Jung-Jae Kim 001; See-Kiong Ng (EMNLP, 2014)

Parse Ranking with Semantic Dependencies and WordNet. - Xiaocheng Yin; Jung-Jae Kim 001; Zinaida Pozen; Francis Bond (GWC, 2014)

Overview of the gene ontology task at BioCreative IV. - Yuqing Mao; Kimberly Van Auken; Donghui Li; Cecilia N. Arighi; Peter McQuilton; G. Thomas Hayman; Susan Tweedie; Mary L. Schaeffer; Stanley J. F. Laulederkind; Shur-Jen Wang; Julien Gobeill; Patrick Ruch; et al. (Database J. Biol. Databases Curation, 2014)

Identifying Features in Opinion Mining via Intrinsic and Extrinsic Domain Relevance. - Zhen Hai; Kuiyu Chang; Jung-Jae Kim 001; Christopher C. Yang (IEEE Trans. Knowl. Data Eng., 2014)

Fast Subgraph Matching on Large Graphs using Graphics Processors. - Ha Nguyen Tran; Jung-Jae Kim 001; Bingsheng He (DASFAA (1), 2015)

Incorporating Trustiness and Collective Synonym/Contrastive Evidence into Taxonomy Construction. - Anh Tuan Luu; Jung-Jae Kim 001; See-Kiong Ng (EMNLP, 2015)

Using supervised learning to classify authentic and fake online reviews. - Snehasish Banerjee; Alton Yeow-Kuan Chua; Jung-Jae Kim 001 (IMCOM, 2015)

Extending the evaluation of Genia Event task toward knowledge base construction and comparison to Gene Regulation Ontology task. - Jin-Dong Kim; Jung-Jae Kim 001; Xu Han 008; Dietrich Rebholz-Schuhmann (BMC Bioinform., 2015)

Term Ranker: A Graph-Based Re-Ranking Approach. - Muhammad Tahir Khan; Yukun Ma; Jung-Jae Kim 001 (FLAIRS, 2016)

Feature-enriched word embeddings for named entity recognition in open-domain conversations. - Yukun Ma; Jung-Jae Kim 001; Benjamin Bigot; Muhammad Tahir Khan (ICASSP, 2016)

Clustering based active learning for biomedical Named Entity Recognition. - Xu Han 008; Chee Keong Kwoh 001; Jung-Jae Kim 001 (IJCNN, 2016)

Active learning for ontological event extraction incorporating named entity recognition and unknown word handling. - Xu Han 008; Jung-Jae Kim 001; Chee Keong Kwoh 001 (J. Biomed. Semant., 2016)

An Empirical Study on Collective Online Behaviors of Extremist Supporters. - Jung-Jae Kim 001; Yong Liu 020; Wee-Yong Lim; Vrizlynn L. L. Thing (ADMA, 2017)

End-to-End Video Classification with Knowledge Graphs. - Fang Yuan; Zhe Wang 019; Jie Lin 001; Luis Fernando D'Haro; Jung-Jae Kim 001; Zeng Zeng; Vijay Chandrasekhar 001 (CoRR, 2017)

Don't be deceived: Using linguistic analysis to learn how to discern online review authenticity. - Snehasish Banerjee; Alton Y. K. Chua; Jung-Jae Kim 001 (J. Assoc. Inf. Sci. Technol., 2017)

Periodic-CRN: A Convolutional Recurrent Model for Crowd Density Prediction with Recurring Periodic Patterns. - Ali Zonoozi; Jung-Jae Kim 001; Xiao-Li Li 001; Gao Cong (IJCAI, 2018)

DigChem: Identification of disease-gene-chemical relationships from Medline abstracts. - Jeongkyun Kim; Jung-Jae Kim 001; Hyunju Lee (PLoS Comput. Biol., 2019)

Effective Identification of Distinctive Wordmarks. - Sujatha Das Gollapalli; Jung-Jae Kim 001 (WWW (Companion Volume), 2020)

DocOIE: A Document-level Context-Aware Dataset for OpenIE. - Kuicai Dong; Yilin Zhao; Aixin Sun; Jung-Jae Kim 001; Xiaoli Li 001 (ACL/IJCNLP (Findings), 2021)

Analyzing Code Embeddings for Coding Clinical Narratives. - Wei Shi 003; Jiewen Wu; Xiwen Yang; Nancy F. Chen; Ivan Ho Mien; Jung-Jae Kim 001; Pavitra Krishnaswamy (ACL/IJCNLP (Findings), 2021)

Unseen Entity Handling in Complex Question Answering over Knowledge Base via Language Generation. - Xin Huang; Jung-Jae Kim 001; Bowei Zou (EMNLP (Findings), 2021)

Controlling Industrial Robots with High-Level Verbal Commands. - Dongkyu Choi; Wei Shi 003; Ying Siu Liang; Kheng Hui Yeo; Jung-Jae Kim 001 (ICSR, 2021)

Gaze Assisted Visual Grounding. - Kritika Johari; Christopher Tay Zi Tong; Vigneshwaran Subbaraju; Jung-Jae Kim 001; U-Xuan Tan (ICSR, 2021)

Pure Transformer with Integrated Experts for Scene Text Recognition. - Yew Lee Tan; Adams Wai-Kin Kong; Jung-Jae Kim 001 (ECCV (28), 2022)

Syntactic Multi-view Learning for Open Information Extraction. - Kuicai Dong; Aixin Sun; Jung-Jae Kim 001; Xiaoli Li 001 (EMNLP, 2022)

Portmanteauing Features for Scene Text Recognition. - Yew Lee Tan; Ernest Yu Kai Chew; Adams Wai-Kin Kong; Jung-Jae Kim 001; Joo Hwee Lim (ICPR, 2022)

taochen at SemEval-2022 Task 5: Multimodal Multitask Learning and Ensemble Learning. - Chen Tao; Jung-Jae Kim 001 (SemEval@NAACL, 2022)

Semantists at ImageArg-2023: Exploring Cross-modal Contrastive and Ensemble Models for Multimodal Stance and Persuasiveness Classification. - Kanagasabai Rajaraman; Hariram Veeramani; Saravanan Rajamanickam; Adam Maciej Westerski; Jung-Jae Kim 001 (ArgMining@EMNLP, 2023)

Open Information Extraction via Chunks. - Kuicai Dong; Aixin Sun; Jung-Jae Kim 001; Xiaoli Li 001 (EMNLP, 2023)

From Speculation Detection to Trustworthy Relational Tuples in Information Extraction. - Kuicai Dong; Aixin Sun; Jung-Jae Kim 001; Xiaoli Li 001 (EMNLP (Findings), 2023)

Shall We Trust All Relational Tuples by Open Information Extraction? A Study on Speculation Detection. - Kuicai Dong; Aixin Sun; Jung-Jae Kim 001; Xiaoli Li 001 (CoRR, 2023)

On the Selection of Positive and Negative Samples for Contrastive Math Word Problem Neural Solver. - Yiyao Li; Lu Wang; Jung-Jae Kim 001; Chor Seng Tan; Ye Luo (EDM, 2024)

TransferCVLM: Transferring Cross-Modal Knowledge for Vision-Language Modeling. - Dongha Choi; Jung-Jae Kim 001; Hyunju Lee (EMNLP (Findings), 2024)

Contrastive Learning with Bidirectional Transformers for Knowledge Tracing. - Huijing Zhan; Jung-Jae Kim 001; Guimei Liu (ICASSP, 2024)

Automated Math Word Problem Knowledge Component Labeling and Recommendation. - Chor Seng Tan; Jung-Jae Kim 001 (MIS4TEL, 2024)

Question Difficulty Consistent Knowledge Tracing. - Guimei Liu; Huijing Zhan; Jung-Jae Kim 001 (WWW, 2024)

Eye movement analysis for real-world settings using segmented linear regression. - Kritika Johari; Rishabh Bhardwaj; Jung-Jae Kim 001; Wei Quin Yow; U-Xuan Tan (Comput. Biol. Medicine, 2024)

CoinMath: Harnessing the Power of Coding Instruction for Math LLMs. - Chengwei Wei; Bin Wang 040; Jung-Jae Kim 001; Guimei Liu; Nancy F. Chen (CoRR, 2024)

Manufacturing domain instruction comprehension using synthetic data. - Kritika Johari; Christopher Tay Zi Tong; Rishabh Bhardwaj; Vigneshwaran Subbaraju; Jung-Jae Kim 001; U-Xuan Tan (Vis. Comput., 2024)

CoinMath: Harnessing the Power of Coding Instruction for Math LLM. - Chengwei Wei; Bin Wang 040; Jung-Jae Kim 001; Guimei Liu; Nancy F. Chen (ACL (Findings), 2025)

Enhancing vision-language models through pre-training-free knowledge fusion with TransferCVLM. - Dongha Choi; Jung-Jae Kim 001; Hyunju Lee (Knowl. Based Syst., 2025)

A foundation model-based framework for unsupervised gaze anomaly detection. - Kritika Johari; Jung-Jae Kim 001; Wei Quin Yow; U-Xuan Tan (Knowl. Based Syst., 2025)

Towards Spoken Mathematical Reasoning: Benchmarking Speech-based Models over Multi-faceted Math Problems. - Chengwei Wei; Bin Wang 040; Jung-Jae Kim 001; Nancy F. Chen (CoRR, 2025)