Foldit Standalone: a video game-derived protein structure manipulation interface using Rosetta. - Robert Kleffner; Jeff Flatten; Andrew Leaver-Fay; David Baker 001; Justin B. Siegel; Firas Khatib; Seth Cooper (Bioinform., 2017)

Repurposing citizen science games as software tools for professional scientists. - Seth Cooper; Amy L. R. Sterling; Robert Kleffner; William M. Silversmith; Justin B. Siegel (FDG, 2018)

Assessing Alkene Reactivity toward Cytochrome P450-Mediated Epoxidation through Localized Descriptors and Regression Modeling. - Phillip W. Gingrich; Justin B. Siegel; Dean J. Tantillo (J. Chem. Inf. Model., 2022)

Wrapped in Story: The Affordances of Narrative for Citizen Science Games. - Josh Aaron Miller; Katherine Buse; Ranjodh Singh Dhaliwal; Justin B. Siegel; Seth Cooper; Colin Milburn (FDG, 2023)

Protein stability prediction by fine-tuning a protein language model on a mega-scale dataset. - Simon K. S. Chu; Kush Narang; Justin B. Siegel (PLoS Comput. Biol., 2024)