FAST: FPGA-based Acceleration of Genomic Sequence Trimming. - Behnam Khaleghi; Tianqi Zhang; Niya Shao; Ameen Akel; Ken Curewitz; Justin Eno; Sean Eilert; Niema Moshiri; Tajana Rosing (BioCAS, 2022)

SALIENT: Ultra-Fast FPGA-based Short Read Alignment. - Behnam Khaleghi; Tianqi Zhang; Cameron Martino; George Armstrong; Ameen Akel; Ken Curewitz; Justin Eno; Sean Eilert; Rob Knight 001; Niema Moshiri; Tajana Rosing (FPT, 2022)

To PIM or not for emerging general purpose processing in DDR memory systems. - Alexandar Devic; Siddhartha Balakrishna Rai; Anand Sivasubramaniam; Ameen Akel; Sean Eilert; Justin Eno (ISCA, 2022)