A Multiscale Framework Based on the Physiome Markup Languages for Exploring the Initiation of Osteoarthritis at the Bone-Cartilage Interface. - Vickie B. Shim; Peter J. Hunter; Peter Pivonka; Justin W. Fernandez (IEEE Trans. Biomed. Eng., 2011)

Integrating degenerative mechanisms in bone and cartilage: A multiscale approach. - Justin W. Fernandez; Vickie B. Shim; Peter J. Hunter (EMBC, 2012)

Investigation of the role of crimps in collagen fibers in tendon with a microstructually based finite element model. - Vickie B. Shim; Justin W. Fernandez; Thor F. Besier; Peter J. Hunter (EMBC, 2012)

Computer modelling integrated with micro-CT and material testing provides additional insight to evaluate bone treatments: Application to a beta-glycan derived whey protein mice model. - Dharshini Sreenivasan; Pao Ting Tu; Michelle Dickinson; Maureen Watson; Anne Blais; Raj Das; Jillian Cornish; Justin Fernandez 001 (Comput. Biol. Medicine, 2016)

A 3D Ultrasound Informed Model of the Human Gastrocnemius Muscle. - Massoud Alipour; Kumar Mithraratne; Robert D. Herbert; Justin Fernandez 001 (BIVPCS/POCUS@MICCAI, 2017)

Rapid Prediction of Personalised Muscle Mechanics: Integration with Diffusion Tensor Imaging. - Justin W. Fernandez; Kumar Mithraratne; Massoud Alipour; Geoffrey G. Handsfield; Thor F. Besier; Ju Zhang 002 (BIVPCS/POCUS@MICCAI, 2017)

Ensemble of Convolutional Neural Networks for Heart Segmentation. - Wilson Fok; Kevin Jamart; Jichao Zhao; Justin Fernandez 001 (STACOM@MICCAI, 2018)

A Special Section on Informatics of Medical Image Application in Sports Injury. - Yaodong Gu; Justin Fernandez 001; Julien S. Baker; Jan Awrejcewicz (J. Medical Imaging Health Informatics, 2019)

Rapid Prediction of Brain Injury Pattern in mTBI by Combining FE Analysis With a Machine-Learning Based Approach. - Vickie B. Shim; Samantha J. Holdsworth; Allen A. Champagne; Nicole S. Coverdale; Douglas J. Cook; Tae-Rin Lee; Alan D. Wang 001; Shaofan Li; Justin W. Fernandez (IEEE Access, 2020)

Relationship between lower lumbar spine shape and patient bone metabolic activity as characterised by 18F NaF bio-markers. - Shasha Yeung; Amanjeet Sing Toor; Gerard Deib; Ju Zhang 002; Thor F. Besier; Justin Fernandez 001 (Comput. Biol. Medicine, 2020)

A finite element muscle building block derived from 3D ultrasound: application to the human gastrocnemius. - Massoud Alipour; Kumar Mithraratne; Robert D. Herbert; Justin Fernandez 001 (Comput. methods Biomech. Biomed. Eng. Imaging Vis., 2020)

Towards rapid prediction of personalised muscle mechanics: integration with diffusion tensor imaging. - Justin Fernandez 001; Kumar Mithraratne; Massoud Alipour; Geoffrey G. Handsfield; Thor F. Besier; Ju Zhang 002 (Comput. methods Biomech. Biomed. Eng. Imaging Vis., 2020)

Modelling ballistic cranial injury and backspatter using smoothed particle hydrodynamics. - Eryn Kwon; Michael R. Singh; Ravin D. Vallabh; Raj Das; Michael C. Taylor; Justin W. Fernandez (Comput. methods Biomech. Biomed. Eng. Imaging Vis., 2020)

An exploratory investigation of patellofemoral joint loadings during directional lunges in badminton. - Lin Yu; Qichang Mei; Nur Ikhwan Mohamad; Yaodong Gu; Justin Fernandez 001 (Comput. Biol. Medicine, 2021)

Remote Patient Monitoring with Wearable Sensors Following Knee Arthroplasty. - Scott M. Bolam; Bruno Batinica; Ted C. Yeung; Sebastian Weaver; Astrid Cantamessa; Teresa C. Vanderboor; Shasha Yeung; Jacob T. Munro; Justin W. Fernandez; Thor F. Besier; Andrew Paul Monk (Sensors, 2021)

Combining advanced magnetic resonance imaging (MRI) with finite element (FE) analysis for characterising subject-specific injury patterns in the brain after traumatic brain injury. - Vickie B. Shim; Maryam Tayebi; Eryn Kwon; Sarah Jane Guild; Miriam Scadeng; David J. Dubowitz; Fiona McBryde; Samuel Rosset; Alan Wang 001; Justin Fernandez 001; Shaofan Li; Samantha J. Holdsworth (Eng. Comput., 2022)

Recent Machine Learning Progress in Lower Limb Running Biomechanics With Wearable Technology: A Systematic Review. - Liangliang Xiang; Alan Wang 001; Yaodong Gu; Liang Zhao; Vickie B. Shim; Justin Fernandez 001 (Frontiers Neurorobotics, 2022)

Delayed skeletal muscle repair following inflammatory damage in simulated agent-based models of muscle regeneration. - Stephanie Khuu; Justin W. Fernandez; Geoffrey G. Handsfield (PLoS Comput. Biol., 2023)

Contribution of ankle motion pattern during landing to reduce the knee-related injury risk. - Datao Xu; Huiyu Zhou 004; Meizi Wang; Xin Ma; Gusztáv Fekete; TeoEe Chon; Justin Fernandez 001; Julien S. Baker; Yaodong Gu (Comput. Biol. Medicine, 2024)

Integrating an LSTM framework for predicting ankle joint biomechanics during gait using inertial sensors. - Liangliang Xiang; Yaodong Gu; Zixiang Gao; Peimin Yu; Vickie B. Shim; Alan Wang 001; Justin Fernandez 001 (Comput. Biol. Medicine, 2024)

Advancing post-stroke outcome prediction with movement-specific structural and functional brain atlases. - Triana Karnadipa; Benjamin Chong; Vickie Shim; Justin Fernandez 001; David J. Lin; Cathy Stinear; Alan Wang 001 (NeuroImage, 2025)

Integrating personalized shape prediction, biomechanical modeling, and wearables for bone stress prediction in runners. - Liangliang Xiang; Yaodong Gu; Kaili Deng; Zixiang Gao; Vickie B. Shim; Alan Wang 001; Justin Fernandez 001 (npj Digit. Medicine, 2025)

Foot tissue stress in chronic ankle instability during the stance phase of cutting. - Peimin Yu; Xuanzhen Cen; Liangliang Xiang; Alan Wang 001; Yaodong Gu; Justin Fernandez 001 (Medical Biol. Eng. Comput., 2025)