StochSens - matlab package for sensitivity analysis of stochastic chemical systems. - Michal Komorowski; Justina Zurauskiene; Michael P. H. Stumpf (Bioinform., 2012)

Derivative processes for modelling metabolic fluxes. - Justina Zurauskiene; Paul D. W. Kirk; Thomas Thorne; John Pinney; Michael P. H. Stumpf (Bioinform., 2014)

pcaReduce: hierarchical clustering of single cell transcriptional profiles. - Justina Zurauskiene; Christopher Yau (BMC Bioinform., 2016)