Algorithms for modeling anatomic and target volumes in image-guided neurosurgery and radiotherapy. - Jyrki Alakuijala (2001)

Comparison of Local External Force Functions for Non-rigid Registration of 3D Medical Images. - Hannu Helminen; Jyrki Alakuijala; Katja Pesola; Joakim Laitinen (MICCAI (2), 2003)

Gipfeli - High Speed Compression Algorithm. - Rastislav Lenhardt; Jyrki Alakuijala (DCC, 2012)

Fast keyed hash/pseudo-random function using SIMD multiply and permute. - Jyrki Alakuijala; Bill Cox; Jan Wassenberg (CoRR, 2016)

Brotli Compressed Data Format. - Jyrki Alakuijala; Zoltan Szabadka (RFC, 2016)

Guetzli: Perceptually Guided JPEG Encoder. - Jyrki Alakuijala; Robert Obryk; Ostap Stoliarchuk; Zoltan Szabadka; Lode Vandevenne; Jan Wassenberg (CoRR, 2017)

Users prefer Guetzli JPEG over same-sized libjpeg. - Jyrki Alakuijala; Robert Obryk; Zoltan Szabadka; Jan Wassenberg (CoRR, 2017)

Noise generation for compression algorithms. - Renata Khasanova; Jan Wassenberg; Jyrki Alakuijala (CoRR, 2018)

Randen - fast backtracking-resistant random generator with AES+Feistel+Reverie. - Jan Wassenberg; Robert Obryk; Jyrki Alakuijala; Emmanuel Mogenet (CoRR, 2018)

Committee Draft of JPEG XL Image Coding System. - Alexander Rhatushnyak; Jan Wassenberg; Jon Sneyers; Jyrki Alakuijala; Lode Vandevenne; Luca Versari; Robert Obryk; Zoltan Szabadka; Evgenii Kliuchnikov; Iulia-Maria Comsa; Krzysztof Potempa; Martin Bruse; et al. (CoRR, 2019)

Brotli: A General-Purpose Data Compressor. - Jyrki Alakuijala; Andrea Farruggia; Paolo Ferragina; Eugene Kliuchnikov; Robert Obryk; Zoltan Szabadka; Lode Vandevenne (ACM Trans. Inf. Syst., 2019)

Temporal Coding in Spiking Neural Networks with Alpha Synaptic Function. - Iulia M. Comsa; Thomas Fischbacher; Krzysztof Potempa; Andrea Gesmundo; Luca Versari; Jyrki Alakuijala (ICASSP, 2020)

Intelligent Matrix Exponentiation. - Thomas Fischbacher; Iulia M. Comsa; Krzysztof Potempa; Moritz Firsching; Luca Versari; Jyrki Alakuijala (CoRR, 2020)

Temporal Coding in Spiking Neural Networks With Alpha Synaptic Function: Learning With Backpropagation. - Iulia-Maria Comsa; Krzysztof Potempa; Luca Versari; Thomas Fischbacher; Andrea Gesmundo; Jyrki Alakuijala (IEEE Trans. Neural Networks Learn. Syst., 2022)

CDPU: Co-designing Compression and Decompression Processing Units for Hyperscale Systems. - Sagar Karandikar; Aniruddha N. Udipi; Junsun Choi; Joonho Whangbo; Jerry Zhao; Svilen Kanev; Edwin Lim; Jyrki Alakuijala; Vrishab Madduri; Yakun Sophia Shao; Borivoje Nikolic; Krste Asanovic; et al. (ISCA, 2023)

Users prefer Jpegli over same-sized libjpeg-turbo or MozJPEG. - Martin Bruse; Luca Versari; Zoltan Szabadka; Jyrki Alakuijala (CoRR, 2024)

Computational Life: How Well-formed, Self-replicating Programs Emerge from Simple Interaction. - Blaise Agüera y Arcas; Jyrki Alakuijala; James Evans; Ben Laurie; Alexander Mordvintsev; Eyvind Niklasson; Ettore Randazzo; Luca Versari (CoRR, 2024)

WebP Image Format. - James Zern; Pascal Massimino; Jyrki Alakuijala (RFC, 2024)

The JPEG XL Image Coding System: History, Features, Coding Tools, Design Rationale, and Future. - Jon Sneyers; Jyrki Alakuijala; Luca Versari; Zoltan Szabadka; Sami Boukortt; Amnon Cohen-Tidhar; Moritz Firsching; Evgenii Kliuchnikov; Tal Lev-Ami; Eric Portis; Thomas Richter 005; Osamu Watanabe (CoRR, 2025)