Extraction of the Number of Peroxisomes in Yeast Cells by Automated Image Analysis. - Antti Niemistö; Jyrki Selinummi; Ramsey Saleem; Ilya Shmulevich; John D. Aitchison; Olli Yli-Harja (EMBC, 2006)

Three-Dimensional Digital Image Analysis of Immunostained Neurons in Thick Tissue Sections. - Jyrki Selinummi; Pekka Ruusuvuori; Antti Lehmussola; Heikki Huttunen; Olli Yli-Harja; Riitta Miettinen (EMBC, 2006)

Computational Framework for Simulating Fluorescence Microscope Images With Cell Populations. - Antti Lehmussola; Pekka Ruusuvuori; Jyrki Selinummi; Heikki Huttunen; Olli Yli-Harja (IEEE Trans. Medical Imaging, 2007)

Benchmark set of synthetic images for validating cell image analysis algorithms. - Pekka Ruusuvuori; Antti Lehmussola; Jyrki Selinummi; Tiina Rajala; Heikki Huttunen; Olli Yli-Harja (EUSIPCO, 2008)

Synthetic Images of High-Throughput Microscopy for Validation of Image Analysis Methods. - Antti Lehmussola; Pekka Ruusuvuori; Jyrki Selinummi; Tiina Rajala; Olli Yli-Harja (Proc. IEEE, 2008)

On Algorithms for Two and Three Dimensional High Throughput Light Microscopy. - Jyrki Selinummi (2008)

Evaluation of methods for detection of fluorescence labeled subcellular objects in microscope images. - Pekka Ruusuvuori; Tarmo Äijö; Sharif Chowdhury; Cecilia Garmendia-Torres; Jyrki Selinummi; Mirko Birbaumer; Aimée M. Dudley; Lucas Pelkmans; Olli Yli-Harja (BMC Bioinform., 2010)

Polynomial pulp fiber modeling. - Heikki Huttunen; Hannu Oinonen; Jyrki Selinummi; Pekka Ruusuvuori; Ville Voipio (EUSIPCO, 2012)