ATOM: a powerful gene-based association test by combining optimally weighted markers. - Mingyao Li; Kai Wang 049; Struan F. A. Grant; Hakon Hakonarson; Chun Li (Bioinform., 2009)

Multiple testing in genome-wide association studies via hidden Markov models. - Zhi Wei 001; Wenguang Sun; Kai Wang 049; Hakon Hakonarson (Bioinform., 2009)

Doc2Hpo: a web application for efficient and accurate HPO concept curation. - Cong Liu 020; Fabricio Sampaio Peres Kury; Ziran Li; Casey N. Ta; Kai Wang 049; Chunhua Weng (Nucleic Acids Res., 2019)

Genome-wide detection of short tandem repeat expansions by long-read sequencing. - Qian Liu; Yao Tong; Kai Wang 049 (BMC Bioinform., 2020)

Natural language processing (NLP) tools in extracting biomedical concepts from research articles: a case study on autism spectrum disorder. - Jacqueline Peng; Mengge Zhao; James M. Havrilla; Cong Liu 020; Chunhua Weng; Whitney Guthrie; Robert T. Schultz; Kai Wang 049; Yunyun Zhou (BMC Medical Informatics Decis. Mak., 2020)

Detecting differential alternative splicing events in scRNA-seq with or without Unique Molecular Identifiers. - Yu Hu 014; Kai Wang 049; Mingyao Li (PLoS Comput. Biol., 2020)

Expediting knowledge acquisition by a web framework for Knowledge Graph Exploration and Visualization (KGEV): case studies on COVID-19 and Human Phenotype Ontology. - Jacqueline Peng; David Xu 007; Ryan Lee; Siwei Xu; Yunyun Zhou; Kai Wang 049 (BMC Medical Informatics Decis. Mak., 2022)

On the Prime Number Divisibility by Deep Learning. - Da Wu; Jingye Yang; Mian Umair Ahsan; Kai Wang 049 (CoRR, 2023)

Not All Large Language Models (LLMs) Succumb to the "Reversal Curse": A Comparative Study of Deductive Logical Reasoning in BERT and GPT Models. - Jingye Yang; Da Wu; Kai Wang 049 (CoRR, 2023)

Multimodal Machine Learning Combining Facial Images and Clinical Texts Improves Diagnosis of Rare Genetic Diseases. - Da Wu; Jingye Yang; Steven Klein; Cong Liu 020; Tzung-Chien Hsieh; Peter M. Krawitz; Chunhua Weng; Gholson J. Lyon; Jennifer M. Kalish; Kai Wang 049 (CoRR, 2023)

Classification of integers based on residue classes via modern deep learning algorithms. - Da Wu; Jingye Yang; Mian Umair Ahsan; Kai Wang 049 (Patterns, 2023)

Phenotype driven molecular genetic test recommendation for diagnosing pediatric rare disorders. - Fangyi Chen; Priyanka Ahimaz; Quan M. Nguyen; Rachel Lewis; Wendy K. Chung; Casey N. Ta; Katherine M. Szigety; Sarah E. Sheppard; Ian M. Campbell; Kai Wang 049; Chunhua Weng; Cong Liu 020 (npj Digit. Medicine, 2024)

Exploring the reversal curse and other deductive logical reasoning in BERT and GPT-based large language models. - Da Wu; Jingye Yang; Kai Wang 049 (Patterns, 2024)

Enhancing phenotype recognition in clinical notes using large language models: PhenoBCBERT and PhenoGPT. - Jingye Yang; Cong Liu 020; Wendy Deng; Da Wu; Chunhua Weng; Yunyun Zhou; Kai Wang 049 (Patterns, 2024)