All binary representations are equal: but some are more equal than others. - Kai Willadsen; Janet Wiles (IEEE Congress on Evolutionary Computation, 2002)

Dynamics of gene expression in an artificial genome. - Kai Willadsen; Janet Wiles (IEEE Congress on Evolutionary Computation, 2003)

Chapter 6 Perturbation Analysis: A Complex Systems Pattern. - Nicholas Geard; Kai Willadsen; Janet Wiles (Recent Advances in Artificial Life, 2005)

There's more to a model than code: understanding and formalizing in silico modeling experience. - Janet Wiles; Nicholas Geard; James E. M. Watson; Kai Willadsen; John S. Mattick; Daniel R. Bradley; Jennifer Hallinan (GECCO Workshops, 2005)

Robustness in Boolean models of genetic regulatory systems - Kai Willadsen (2006)

Understanding robustness in Random Boolean Networks. - Kai Willadsen; Jochen Triesch; Janet Wiles (ALIFE, 2008)

Sorting the nuclear proteome. - Denis C. Bauer; Kai Willadsen; Fabian A. Buske; Kim-Anh Lê Cao; Timothy L. Bailey; Graham Dellaire; Mikael Bodén (Bioinform., 2011)

NSort/DB: An Intranuclear Compartment Protein Database. - Kai Willadsen; Nurul Mohamad; Mikael Bodén (Genom. Proteom. Bioinform., 2012)