FraHMT: A Fragment-Oriented Heterogeneous Graph Molecular Generation Model for Target Proteins. - Shuang Wang; Dingming Liang; Jianmin Wang 016; Kaiyu Dong; Yunjing Zhang; Huicong Liang; Ximing Xu 001; Tao Song 001 (J. Chem. Inf. Model., 2024)

MIPPIS: protein-protein interaction site prediction network with multi-information fusion. - Shuang Wang; Kaiyu Dong; Dingming Liang; Yunjing Zhang; Xue Li 019; Tao Song 001 (BMC Bioinform., 2024)

MVSO-PPIS: a structured objective learning model for protein-protein interaction sites prediction via multi-view graph information integration. - Shuang Wang; Tianle Ma; Kaiyu Dong; Peifu Han; Xue Li 019; Junteng Ma; Mao Li; Tao Song 001 (Bioinform., 2025)

TarMGDif: Target-Specific Molecular Graphs Generation Based on Diffusion Model. - Shuang Wang; Yunjing Zhang; Dingming Liang; Kaiyu Dong; Tao Song 001 (IEEE J. Biomed. Health Informatics, 2025)

MTMP: Multimodal targeted molecule generation model with protein features. - Dingming Liang; Runfu Yu; Xiaofeng Wang; Kaiyu Dong; Yunjing Zhang; Huicong Liang; Ximing Xu; Tao Song; Shuang Wang (Expert Syst. Appl., 2026)