Searching for the Origins of Life - Detecting RNA Life Signatures Using Learning Vector Quantization. - Thomas Villmann; Marika Kaden; Szymon Wasik; Mateusz Kudla; Kaja Gutowska; Andrea Villmann; Jacek Blazewicz (WSOM+, 2019)

Systems Approach Based on Petri Nets as a Method for Modeling and Analysis of Complex Biological Systems Presented on the Example of Atherosclerosis Development Process. - Kaja Gutowska; Dorota Formanowicz; Piotr Formanowicz (KKA, 2020)

Virxicon: a lexicon of viral sequences. - Mateusz Kudla; Kaja Gutowska; Jaroslaw Synak; Mirko Weber; Katrin Sophie Bohnsack; Piotr Lukasiak; Thomas Villmann; Jacek Blazewicz; Marta Szachniuk (Bioinform., 2021)

On anti-occurrence of subsets of transitions in Petri net-based models of complex biological systems. - Kaja Gutowska; Piotr Formanowicz (Biosyst., 2022)

Learning vector quantization as an interpretable classifier for the detection of SARS-CoV-2 types based on their RNA sequences. - Marika Kaden; Katrin Sophie Bohnsack; Mirko Weber; Mateusz Kudla; Kaja Gutowska; Jacek Blazewicz; Thomas Villmann (Neural Comput. Appl., 2022)

Searching for significant reactions and subprocesses in models of biological systems based on Petri nets. - Kaja Gutowska; Piotr Formanowicz (Comput. Biol. Medicine, 2024)

Exploring relationship between hypercholesterolemia and instability of atherosclerotic plaque - An approach based on a matrix population model. - Mateusz Twardawa; Kaja Gutowska; Piotr Formanowicz (J. Bioinform. Comput. Biol., 2024)