RNA 3D structure prediction guided by independent folding of homologous sequences. - Marcin Magnus; Kalli Kappel; Rhiju Das; Janusz M. Bujnicki (BMC Bioinform., 2019)

DAPTEV: Deep aptamer evolutionary modelling for COVID-19 drug design. - Cameron Andress; Kalli Kappel; Marcus Elbert Villena; Miroslava Cuperlovic-Culf; Hongbin Yan; Yifeng Li (PLoS Comput. Biol., 2023)