SMS: Sequence, Motif and Structure - A Database on the Structural Rigidity of Peptide Fragments in Non-Redundant Proteins. - Bhagavathimuthu Balamurugan; M. N. A. Mohd. Roshan; Daliah Michael; Majumder Ambaree; Subramanyam Divya; Hanumanthagowda Keerthana; Mahadev Seemanthini; Kanagaraj Sekar (Silico Biol., 2006)

A Method to Find Sequentially Separated Motifs in Biological Sequences (SSMBS). - Chetan Kumar; Nishith Kumar; Sarani Rangarajan; Narayanaswamy Balakrishnan 001; Kanagaraj Sekar (PRIB, 2008)

PsRNA: A Computing Engine for the Comparative Identification of Putative Small RNA Locations within Intergenic Regions. - Jayavel Sridhar; Govindaraj Sowmiya; Kanagaraj Sekar; Ziauddin Ahamed Rafi (Genom. Proteom. Bioinform., 2010)

Junker: An Intergenic Explorer for Bacterial Genomes. - Jayavel Sridhar; Radhakrishnan Sabarinathan; Shanmugam Siva Balan; Ziauddin Ahamed Rafi; Paramasamy Gunasekaran; Kanagaraj Sekar (Genom. Proteom. Bioinform., 2011)

As3p: A Fast Algorithm to Search Structurally Similar Proteins. - Rohit Satish; Ravichandran Akshaya; Radhakrishnan Sabarinathan; Marthandan Kirti Vaishnavi; Durairaj Sherlin; Manickam Gurusaran; Kanagaraj Sekar (ICIC (3), 2012)

SMS 2.0: An Updated Database to Study the Structural Plasticity of Short Peptide Fragments in Non-redundant Proteins. - Dheeraj Ravella; Muthukumarasamy Uthaya Kumar; Durairaj Sherlin; Mani Shankar; Marthandan Kirti Vaishnavi; Kanagaraj Sekar (Genom. Proteom. Bioinform., 2012)

Homepeptide Repeats: Implications for Protein Structure, Function and Evolution. - Muthukumarasamy Uthaya Kumar; Bowdadu Benazir; Sanjeev Patra; Marthandan Kirti Vaishnavi; Manickam Gurusaran; Kanagarajan Sureka; Jeyaraman Jeyakanthan; Kanagaraj Sekar (Genom. Proteom. Bioinform., 2012)

Molecular Dynamics Perspective on the Protein Thermal Stability: A Case Study Using SAICAR Synthetase. - Kavyashree Manjunath; Kanagaraj Sekar (J. Chem. Inf. Model., 2013)

Haemophilus influenzae Genome Database (HIGDB): A single point web resource for Haemophilus influenzae. - Rayapadi G. Swetha; Dinesh Kumar Kala Sekar; Sudha Ramaiah; Anand Anbarasu; Kanagaraj Sekar (Comput. Biol. Medicine, 2014)

Ebolavirus Database: Gene and Protein Information Resource for Ebolaviruses. - Rayapadi G. Swetha; Sudha Ramaiah; Anand Anbarasu; Kanagaraj Sekar (Adv. Bioinformatics, 2016)

Molecular docking and molecular dynamics simulations of fumarate hydratase and its mutant H235N complexed with pyromellitic acid and citrate. - S. Subasri; Santosh Kumar Chaudhary; Kanagaraj Sekar; Manish Kesherwani; Devadasan Velmurugan (J. Bioinform. Comput. Biol., 2017)

RepEx: A web server to extract sequence repeats from protein and DNA sequences. - Daliah Michael; Manickam Gurusaran; R. Santhosh; Md. Khaja Hussain; S. N. Satheesh; S. Suhan; P. Sivaranjan; Akanksha Jaiswal; Kanagaraj Sekar (Comput. Biol. Chem., 2019)

In vitro and in silico perspectives to explain anticancer activity of a novel syringic acid analog ((4-(1H-1, 3-benzodiazol-2-yl)-2, 6-dimethoxy phenol)) through apoptosis activation and NFkB inhibition in K562 leukemia cells. - Srinivasulu Cheemanapalli; Chandrasekaran Palaniappan; Yeshwanth Mahesh; Yuvaraj Iyyappan; Suresh Yarrappagaari; Kanagaraj Sekar (Comput. Biol. Medicine, 2023)

CSSP-2.0: A refined consensus method for accurate protein secondary structure prediction. - Madhumathi Sanjeevi; Ajitha Mohan; Dhanalakshmi Ramachandran; Jeyaraman Jeyakanthan; Kanagaraj Sekar (Comput. Biol. Chem., 2024)

MyxoPortal: a database of myxobacterial genomic features. - Rayapadi G. Swetha; Benita S. Arakal; Santhosh Rajendran; Kanagaraj Sekar; David E. Whitworth; Sudha Ramaiah; Philip E. James; Paul G. Livingstone; Anand Anbarasu (Database J. Biol. Databases Curation, 2024)