The Triform algorithm: improved sensitivity and specificity in ChIP-Seq peak finding. - Karl Kornacker; Morten Rye; Tony Håndstad; Finn Drabløs (BMC Bioinform., 2012)

MetaCycle: an integrated R package to evaluate periodicity in large scale data. - Gang Wu; Ron C. Anafi; Michael Hughes; Karl Kornacker; John B. Hogenesch (Bioinform., 2016)